EY711517

Overview
NameEY711517
Unique NameEY711517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PCE C             CR C G+G   +  GF S+ QTC  C G G II N C+SC G+ V    +++++ I  G+
Sbjct:  135 KTITFTAPAPCEVCDGKGSKNPNDVETCRTCHGTGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCQSCHGSGVADRQQTLEVTIPAGV 221
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PC+ C             C+ C GSG   +  GF S+ QTC  C G G II N C +C G+ V    +++++ I  G+
Sbjct:  137 KTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGV 223
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PC+ C             C+ C GSG   +  GF S+ QTC  C G G II N C +C G+ V    +++++ I  G+
Sbjct:  137 KTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGV 223
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PC+ C             C+ C GSG   +  GF S+ QTC  C G G II N C +C G+ V    +++++ I  G+
Sbjct:  137 KTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGV 223
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PC+ C             C+ C GSG   +  GF S+ QTC  C G G II N C +C G+ V    +++++ I  G+
Sbjct:  137 KTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGV 223
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PC+ C             C+ C GSG   +  GF S+ QTC  C G G II N C +C G+ V    +++++ I  G+
Sbjct:  137 KTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGV 223
[Close]
BLAST of EY711517 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 2 
Query:    2 KTVTFQTELPCEACXXXXXXXXXXXXXCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGI 262
            KT+TF    PC+ C             C+ C GSG   +  GF S+ QTC  C G G II N C +C G+ V    +++++ I  G+
Sbjct:  137 KTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGV 223
The following BLAST results are available for this feature:
BLAST of EY711517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DNAJ_ACIAD9.202e-1236.78Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_ACIBY7.790e-1134.48Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT7.790e-1134.48Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS7.790e-1134.48Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC7.790e-1134.48Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB57.790e-1134.48Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB37.790e-1134.48Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-F05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711517 ID=EY711517; Name=EY711517; organism=Citrus sinensis; type=EST; length=928bp
CAAAACTGTTACATTTCAAACGGAGTTGCCTTGTGAAGCTTGTGGTGGGG
AAGGCGTCCCTCCTGGAGTGAAACCTGAAAAATGTAGGCGCTGTAAGGGA
TCCGGCATGGAGTCCATACATTCTGGCTTTATGAGCATTAATCAAACTTG
CCGACAATGTGGTGGAACAGGCCATATTATCACGAACTGGTGCAAGTCAT
GCAAAGGAGCTAGAGTAGTGAAGGGATCAAAATCAGTGAAATTGGATATT
ATGCCAGGTATTGTTTGGATTTTGAAGCATTGGTGATTGCTTTGGTTATT
GTTTAATTATTTCATTATGATCTATTTCTGTGGGCTCACATGATCCCCTG
CAGAGACACAGATTATTTATGTTGAAAGTCTGACATCTAAAATAGTTTTT
TTTTTTTTAAATTAAATATTTCAAGTTTTCATACAAGACATCTCAAACCA
ATGCAAATTCTCTTTTTCATTTGGTCCTTGATTATGGTAGTTGTCTTTCA
CCCTCTTTTGTCTGGCTCCAATGCTGGAGCTAGGGACTCTGAGGGAGCTT
TTCTTATTTGTAGTTTTGATCTGGAAATGCCACCAGAAGTTGAAAAAGCA
AACTATGGAGCATGTGTTTCAGCTTGTATTTTTGGTGGTACCTAGTTCGA
ATACTTCCTGTAGAGGGCATTACTTGAGACAGAGAGACTCGTATGTTCTG
TTATTGAATATGANGAGATAGGAAAGACTTTTGAGTTTNGAAACTGCACA
ACCTGNATATGGGCAGTGNTGGGGGGAATTTTTTCATGCTTTTAGAATTG
CNNAACTCGATCTATATTANGTCTCCCTATGGAATATANCTCATTACATT
TCTGTGCAATTACAGAATGCATTCCTCACTTATTATGCATCACATAGGTA
TCCCNAATGTATCANTANGCTCTGAATA
back to top