EY711513

Overview
NameEY711513
Unique NameEY711513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U497B_ARATH (UPF0497 membrane protein At2g37200 OS=Arabidopsis thaliana GN=At2g37200 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.630e-57
Identity = 116/180 (64.44%), Postives = 133/180 (73.89%), Query Frame = 1
Query:   58 MFASRPAVHPVEAPPLTEAAGL----RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 585
            M  SRPA+HPV+A P+   AG      VRMKDVQGMPGT GGL+LRL QFV A I+VSVM +TSDF  ATAFC                   D YA+LVRRSLRN  V++ FT+GDG+TSTLT+AAA +SAGITVLI NDL +C +NHCTRFETATAMAFISWFA SPSF+LNFWSLA+H
Sbjct:    2 MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLATH 180          
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U4977_ARATH (UPF0497 membrane protein At2g28370 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52
Identity = 106/178 (59.55%), Postives = 125/178 (70.22%), Query Frame = 1
Query:   58 MFASRPAVHPVEAPPL--TEAAGL-RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 582
            M  S  +VHPVE PP   TE     RVRM D++GMPGT  GL LR  QF+FAA A+ VMASTSDF   TAFCY                  D+YAI+V+RSL+N +++ LF +GDG+TSTLT+AAAC+SAGITVLI NDLN C  NHC +FET+TA+AFISWFA  PSFL NFWSLAS
Sbjct:    1 MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178          
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U497L_ARATH (UPF0497 membrane protein At3g53850 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.179e-23
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  133 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINH---CTRFETATAMAFISWFATSPSFLLNFWSLAS 582
            MK + G PGT  GL+LR+ Q   AA ++ VM S  +F   TAFCY                  D+YA+  ++ L+N  ++ LF VGD +T+ L+ AAACSSAG+ VL   D+  C       C R+E A A++F++W   + S  + FW LAS
Sbjct:    1 MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQYPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153          
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U497J_ARATH (UPF0497 membrane protein At3g23200 OS=Arabidopsis thaliana GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.011e-23
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  133 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGIN-HCTRFETATAMAFISWFATSPSFLLNFWSLAS 582
            M D+ G PGT  GLVLR+ Q VFAA ++S M ++  F   TAFCY                  D +A++ +++L +  ++ LF VGD +TSTL+ A A SSAGITVL   DL  C     C +++ + A+AF+ W   + S L   W LAS
Sbjct:    1 MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151          
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U497X_ARATH (UPF0497 membrane protein At5g02060 OS=Arabidopsis thaliana GN=At5g02060 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.981e-23
Identity = 60/151 (39.74%), Postives = 81/151 (53.64%), Query Frame = 1
Query:  133 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGIN---HCTRFETATAMAFISWFATSPSFLLNFWSL 576
            MK + G PGT  GL+LRL Q   AA ++ VM S+ DF   TAFC+                  D+YAI  +  LR+  ++ LFTVGD +T+ L  AAACSSAG+TVL + D   C       C RF+ +  ++F +WF  + S    FW L
Sbjct:    1 MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPALSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151          
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U4974_ARATH (Putative UPF0497 membrane protein At1g49405 OS=Arabidopsis thaliana GN=At1g49405 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 44/150 (29.33%), Postives = 75/150 (50.00%), Query Frame = 1
Query:  133 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 582
            M +V G  GT   L LRL Q V A  ++  M     F++ TAFCY                  DIY +++++  +  +++   ++GD + S L  A+A S+A +  ++ ++ + C    C R++ A  +AF++WF +  S L N W L S
Sbjct:    1 MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTLAMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESSCPPTICNRYQFAATLAFLTWFLSLSSSLFNLWLLPS 150          
BLAST of EY711513 vs. ExPASy Swiss-Prot
Match: U497K_ARATH (UPF0497 membrane protein At3g50810 OS=Arabidopsis thaliana GN=At3g50810 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15
Identity = 47/151 (31.13%), Postives = 74/151 (49.01%), Query Frame = 1
Query:  133 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISN-DLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 582
            M+ V G  GT     LR  Q +F+A ++  M    DF++ T FCY                  D Y++LV+   +  +V+ +   GD + S L+   AC+ A  T L+++ D   C  + C +++ + A+AF+ WF    S L NFWSL S
Sbjct:    1 MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILLALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSLCIQYQVSAALAFLCWFLLLASALFNFWSLPS 151          
The following BLAST results are available for this feature:
BLAST of EY711513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
U497B_ARATH1.630e-5764.44UPF0497 membrane protein At2g37200 OS=Arabidopsis ... [more]
U4977_ARATH4.594e-5259.55UPF0497 membrane protein At2g28370 OS=Arabidopsis ... [more]
U497L_ARATH1.179e-2338.56UPF0497 membrane protein At3g53850 OS=Arabidopsis ... [more]
U497J_ARATH2.011e-2339.74UPF0497 membrane protein At3g23200 OS=Arabidopsis ... [more]
U497X_ARATH9.981e-2339.74UPF0497 membrane protein At5g02060 OS=Arabidopsis ... [more]
U4974_ARATH1.182e-1529.33Putative UPF0497 membrane protein At1g49405 OS=Ara... [more]
U497K_ARATH5.865e-1531.13UPF0497 membrane protein At3g50810 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-F01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711513 ID=EY711513; Name=EY711513; organism=Citrus sinensis; type=EST; length=837bp
GGTTTTTGATGGTCGACTTTTGGTCAAATTAATCGGGGGGGCTTATAACC
GAAAGCGATGTTCGCGAGCCGGCCAGCGGTGCACCCAGTGGAGGCGCCAC
CGTTGACTGAGGCGGCGGGACTTAGAGTTAGAATGAAGGATGTGCAAGGC
ATGCCTGGGACACCTGGCGGCCTTGTTCTTCGTCTTCTTCAGTTTGTTTT
CGCAGCCATAGCAGTCTCTGTCATGGCCTCCACCAGTGATTTTCACGAAG
CCACCGCTTTTTGCTACCTAGTTCTTGCTCTAGGCTTGCAAAGTTTGTGG
AGTCTATCCCTGTTAGTGCTTGATATATATGCTATCCTGGTGAGAAGAAG
TCTGCGGAATGATAAGGTTATCCGTTTATTTACCGTTGGTGATGGGATCA
CATCCACCCTTACATATGCAGCCGCCTGCTCATCTGCAGGAATCACAGTT
CTTATCAGCAATGATCTTAACCGATGTGGAATTAACCACTGTACAAGGTT
TGAGACTGCTACGGCAATGGCTTTTATCAGTTGGTTTGCTACTTCACCAT
CCTTTCTCCTGAATTTCTGGTCATTGGCTTCCCACTAAGAATTGGGTAGA
CAAGAGTCCCATATCAGCAAAGAACCACTAAGAATTGGGTAGACAAGAGT
TCATAATCAGCAAAGAACCATACTTTCGATGCACAGATTTTCCTATGTAA
CTCCAGCTATGGAATTGATTAAAGTGTACCTACTGTGTACATATATAAAG
TGTGCTGGATATTTTTCAATGAACGAACATATGAAACGTGGAATGACTTT
ACATTACCNNTTTAGCCTTGNTAAAAAAAAAAAAAAG
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