EY711483

Overview
NameEY711483
Unique NameEY711483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711483_ssr36 microsatellite EY711483_ssr36:36..49. BLAST: Citrus ESTs to Prunus persica proteins V1
EY711483_ssr688 microsatellite EY711483_ssr688:688..702. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 7.632e-55
Identity = 113/168 (67.26%), Postives = 133/168 (79.17%), Query Frame = 1
Query:  124 TEPW-LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFL 612
            TEPW + ENG+  + +K    E+R GRTAHNMSSSSLRKKSDL ++ K+ +  L+  L+N+QEVILGTKL++LFPAIP AII    G ++PW+F LSLLGLTPLAERVSFLTEQ+AFYTGPT+GGLLNATCGNATELIIAI AL   K+ VVKYSLLGS    LL  L
Sbjct:    6 TEPWSVAENGNPSITAKGSSRELRLGRTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVL 173          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.700e-54
Identity = 113/168 (67.26%), Postives = 130/168 (77.38%), Query Frame = 1
Query:  127 EPW--LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFL 612
            EPW  + ENG+  V +K    E+RHGRTAHNMSSSSLRKKSDL LV K+    L+  L+N+QEVILGTKL++LF AIPLAI+   + +  P +F LSL+GLTPLAERVSFLTEQ+AFYTGPTVGGLLNATCGNATELIIAI AL   K+ VVKYSLLGS    LL  L
Sbjct:    6 EPWAAIAENGNANVTAKGSSRELRHGRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVL 173          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.732e-51
Identity = 109/146 (74.66%), Postives = 117/146 (80.14%), Query Frame = 1
Query:  181 HGR--TAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFL 612
            HGR  TAHNMSSSSLRKKSD  LV K+    LR  LAN+QEV L TKL+VLFPA+PLAI  QCF F + WVFALSLLGL PLAERVSFLTEQIA YTGPTVGGLLNATCGNATELIIA+FAL + KI+VVK SLLGS    LL  L
Sbjct:   19 HGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVL 164          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.198e-45
Identity = 99/172 (57.56%), Postives = 128/172 (74.42%), Query Frame = 1
Query:  136 LMENG---SVKVLSKEIRHGRTAHNMSSSSL-RKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFLALRSSVEGL 639
            L+ENG   S K  ++  R  R    +S+SSL RK+SDL L+S++R+  +RR L N+QEV+LGTKL +LFPA+PLA++   +     WVFALSLLGLTPLAER+SFLTEQIAF+TGPTVGGL+NATCGNATE+IIAI A+ +RK+ +VK SLLGS    LL+ L     + G+
Sbjct:   14 LLENGGGGSDKPTAETSR--RVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGI 183          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.547e-42
Identity = 93/166 (56.02%), Postives = 113/166 (68.07%), Query Frame = 1
Query:  187 RTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFLALRSSVEGLPISEGQNTIENSRCH 684
            RTAHN+SSSSLRK SD +L+ K+    LR  LAN+ +V+L T+L +LFPA+ LAI      F + WVF LSL+GL PLAER+SFLTEQIAFYTGPTVGGLLNAT GN TE+IIA+ AL E KI+VVK SLLGS    LL  L     + G+         +  + H
Sbjct:   31 RTAHNLSSSSLRKSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAH 196          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.311e-30
Identity = 72/127 (56.69%), Postives = 90/127 (70.87%), Query Frame = 1
Query:  262 PCLRRCL----ANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFLALRSSV 630
            P LRR L    A +QEV+LGTKL  LF A+PLA+  +       WVFA SL+GL PLAERVSFL+E IA   GPT GG++NATCGN  ELIIA+FAL++ K++++K+SLLGS    LL  L L SS+
Sbjct:   59 PLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLL--LVLGSSL 183          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 1
Query:  271 RRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFA-EPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFLALRSSVEGL 639
            RR L +++ VIL  K++VL P  PLA++        + WVF  SL+G+TPLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL    I VV+ SLLGS    +L  L       GL
Sbjct:   58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGL 181          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.480e-24
Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  280 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLL 603
            L +I+ VI  +KL++L P  P +II          VF  S+LG+TPLAER+ + TEQ+A YTGPTVGGLLNAT GNATE+IIAI+AL    I VV+ SLLGS    +L
Sbjct:   41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNML 148          

HSP 2 Score: 29.261 bits (64), Expect = 1.480e-24
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  579 GFILSNPSLVLGTSLFCGGIAH 644
            G ILSN  LV+G + F GGI H
Sbjct:  141 GSILSNMLLVMGCAFFAGGIVH 162          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24
Identity = 63/130 (48.46%), Postives = 82/130 (63.08%), Query Frame = 1
Query:  280 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFLALRSSVEGLPISEGQNTIE 669
            L + + VIL  KL++L P  PLAI+       + W+F LSL+G+TPLAER+ + TEQ+A YTG TVGGLLNAT GN TELII+IFAL    I VV+ +LLGS    +L  L       GL  S+ +   +
Sbjct:   65 LQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQKEQVFD 194          
BLAST of EY711483 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23
Identity = 63/120 (52.50%), Postives = 80/120 (66.67%), Query Frame = 1
Query:  280 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSLLGSFSQTLLWFLALRSSVEGL 639
            L +I+ VI   KL++L P  PLAI+      ++ WVF L+L+G+TPLAER+ + TEQ+A YTGPTVGGLLNAT GN TELII+IFAL    I VV+ +LLGS    +L  L       GL
Sbjct:   65 LNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGL 184          
The following BLAST results are available for this feature:
BLAST of EY711483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CAX1_ARATH7.632e-5567.26Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX3_ARATH1.700e-5467.26Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1A_ORYSJ8.732e-5174.66Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH4.198e-4557.56Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ2.547e-4256.02Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ1.311e-3056.69Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX2_ORYSJ1.404e-2450.00Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]
CAX3_ORYSJ1.480e-2454.63Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]
CAX5_ARATH6.967e-2448.46Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX2_ARATH1.188e-2352.50Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-C05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711483 ID=EY711483; Name=EY711483; organism=Citrus sinensis; type=EST; length=848bp
CAAAATTTTCTCTCTCATCAATCTTTAATCAAAAAATATATATATATATT
TTTTATTATTAATTGTTTCTATCCTTCGTGTTTTTTTTTTTCTTTCAATT
GCATTTGTGAAAAAATGGCTTCGACTGAACCATGGCTGATGGAGAATGGC
AGCGTGAAGGTTTTGAGCAAGGAGATCAGACATGGAAGAACTGCACACAA
CATGTCATCCTCCTCGTTGAGGAAAAAATCCGATCTTACCCTTGTCTCGA
AAATTCGATTCCCTTGTCTTAGACGGTGTCTGGCTAATATCCAGGAGGTC
ATTTTGGGGACTAAACTTTCAGTTCTCTTTCCCGCCATTCCTTTAGCCAT
AATCGGCCAGTGTTTTGGATTTGCAGAACCATGGGTATTCGCTCTGAGCT
TACTAGGACTGACTCCTCTGGCTGAACGTGTCAGCTTCTTGACAGAGCAA
ATTGCTTTCTACACTGGCCCAACAGTGGGGGGATTATTGAACGCGACATG
CGGCAATGCCACGGAGCTCATCATAGCAATTTTTGCCCTATACGAACGTA
AAATTGACGTGGTCAAATATTCTCTTTTGGGTTCATTCTCTCAAACCCTT
CTCTGGTTCTTGGCACTTCGCTCTTCTGTGGAGGGATTGCCCATCTCAGA
AGGACAAAATACGATAGAAAACAGCCGATGTCACTCNCTGCTGCTGCTGC
TGGCATTGCTGTGCACATNGTACATTGCTATTCAATACGCTGNCGCCTCT
CTGATATACTGCCANNGCGACCTTCAGCTATCAGAGCAGCAGCATTNAAT
GCTGATGGNTACATCGGCTATCTCGTCTCCATTGTGGACACCCCGGGA
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