EY711478

Overview
NameEY711478
Unique NameEY711478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12395 contig Csv1_Contig12395:21..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.177e-32
Identity = 69/95 (72.63%), Postives = 78/95 (82.11%), Query Frame = 2
Query:  500 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIP 97          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.177e-32
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 2
Query:  500 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILPS 787
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+K Q+DEIL+PAECTIV SLSN+YLDSYVLSE SLFVYPYK++ K  G       +P+
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPA 96          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 2
Query:  503 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIP 97          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 2
Query:  497 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK QLDEIL PAECTIV +LSN+Y+DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIP 97          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 2
Query:  500 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSE SLFVYPYK++ K  G       +P
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIP 95          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.689e-31
Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 2
Query:  497 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLSK QLDEIL PAECTIV +LSN+Y+DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIP 97          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.512e-31
Identity = 66/95 (69.47%), Postives = 77/95 (81.05%), Query Frame = 2
Query:  500 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+K QLDEIL PAECTIV +LSN+Y+DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIP 95          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.587e-31
Identity = 66/95 (69.47%), Postives = 76/95 (80.00%), Query Frame = 2
Query:  500 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            MAL  SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSE SLFVYPYK++ K  G       +P
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIP 95          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.026e-29
Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = 2
Query:  500 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVG 757
            M+  VSAIGFEG+EKRLE+SFFEP  FADP G+GLR LSK+QLDE L PAECTIV+SLSNE++DSYVLSE SLFVY YK++ K  G
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCG 86          

HSP 2 Score: 22.3274 bits (46), Expect = 2.026e-29
Identity = 13/28 (46.43%), Postives = 15/28 (53.57%), Query Frame = 1
Query:  739 IIKTCGTTSCFFHPAILKYLSPSRCLVD 822
            IIKTCGTT       +LK + P   L D
Sbjct:   81 IIKTCGTTK------LLKSIPPILKLAD 102          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.467e-29
Identity = 61/84 (72.62%), Postives = 72/84 (85.71%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVG 757
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK QLDEIL PAECTIV SL+NE +DSYVLSE SLFVY YK++ K  G
Sbjct:   25 MALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCG 108          

HSP 2 Score: 22.3274 bits (46), Expect = 4.467e-29
Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 1
Query:  739 IIKTCGTTSCFFHPAILKYLSPSRCL 816
            IIKTCGTT        +  L+   CL
Sbjct:  103 IIKTCGTTKLLHSILPILTLADGLCL 128          
The following BLAST results are available for this feature:
BLAST of EY711478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DCAM_NICSY3.177e-3272.63S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_CATRO3.177e-3269.79S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_TOBAC1.207e-3172.34S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU1.207e-3169.79S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPONI1.207e-3170.53S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DATST2.689e-3168.75S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI3.512e-3169.47S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPOBA4.587e-3169.47S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DAUCA2.026e-2973.26S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM1_DIACA4.467e-2972.62S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-B11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711478 ID=EY711478; Name=EY711478; organism=Citrus sinensis; type=EST; length=857bp
GGAAGGAAATCGAAATTCGTTTTGTGAAACAGAGTTAAAAATCAACCCTT
CTTTAATCCTCAAGGAATTTTATTATTTTTTTGGTCTCTGAATCGAGGGT
TTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCTGAGAAAGG
CTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGCAGTAG
TTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGACGTTCGAC
CTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCTTACTCAAACTGCGTC
CGCAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCCCAAAAAAA
AGCTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCCGTCTTAAT
ACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGTTCTCTCGT
TCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTAAGGCAAGA
TGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAAAGAGGCTT
GAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGAGGTAGGGG
CCTCCGCTCTCTGTCAAAACATCAATTGGATGAAATACTGAAACCTGCGG
AATGCACAATTGTTTCTTCGTTGTCAAATGAATATCTTGATTCATATGTC
CTCTCAGAAATCAGCCTCTTTGTGTACCCTTACAAAGTATTATCAAAACT
TGTGGGACTACAAGCTGCTTCTTTCATCCTGCCATCCTCAAGTATCTGAG
TCCCTCTCGTTGTCTGGTCGATCTGTGAGATCACTCGTGGAAGCTCATAT
TTGCTGG
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