EY711458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711458 vs. ExPASy Swiss-Prot
Match: C3H46_ARATH (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana GN=At3g51950 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.205e-20 Identity = 81/227 (35.68%), Postives = 99/227 (43.61%), Query Frame = 2 Query: 38 GARMFYNNTQDMLWRRKMXXXXXXXXXXXXXSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEPSPENGSNPLPTFSAPAAEKHVANGKEFTSCEENI-NRKDTSLDENNAVPENLEHNLPDSPFASPTKGTGEYFSAFSNNANGTEKDXXXXXXXXXXXXXXXXXXXASLDMASFKSFNCQMPRFSSGHGAIGMYTGTGGPTCPVG 715 G R FYNNTQD+LWR K SRRLM LQLLDVKKH + P+ HSPN F Q+L+ P PL +E+ E+ + K+ S D+ +PE LE +LPDSPFASP + F+++A+ D S SF SFN QMPR AIGM G GGPTC VG Sbjct: 365 GGRGFYNNTQDVLWRSKFEEEILELQ-----SRRLMNLQLLDVKKHFQLNS-------PTNIHSPNPFSQSLISP---------------RPLSVIK-----------REYDGGEKGKGSSKEGSDDDTMNLPERLEDSLPDSPFASP----AHHLLLFADSADNNGSD------LWSPSSDNDDNSTPSTLSDSFNSFNYQMPRLP----AIGMLPGRGGPTCRVG 539
BLAST of EY711458 vs. ExPASy Swiss-Prot
Match: C3H22_ORYSJ (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14 Identity = 75/234 (32.05%), Postives = 103/234 (44.02%), Query Frame = 2 Query: 14 RDPFDL-QHGARMFY--NNTQDMLWRRKMXXXXXXXXXXXXX---SRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEPSPENGSNPLPTFSAPAAEKHVANGKEFTSCEENINRKDTSLDENNAVPENLEHNLPDSPFASPTKGTGEYFSAFSNNANGT------EKDXXXXXXXXXXXXXXXXXXXASLDMASFKSFNCQMPRFSSGHGAIGM 679 RDPFDL Q GARM N+T +M+ RRK+ SRRLM LQLLD+K + A++T + PT N F + PL ++ E P++G T K V G + EE+ + D + ++LEHNLPDSPFASPTK + +F+ G ++LD+ S + F R +S HGAIGM Sbjct: 468 RDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLK-NRAAAAVTTAMAMTIPT--ANAFGSS---QPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDK---EESAGEASLNADSD----QSLEHNLPDSPFASPTKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPSTLDIPSPRDFFSVSSRLASDHGAIGM 688
BLAST of EY711458 vs. ExPASy Swiss-Prot
Match: C3H23_ORYSJ (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica GN=Os03g0329200 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.304e-13 Identity = 76/233 (32.62%), Postives = 105/233 (45.06%), Query Frame = 2 Query: 11 ARDPFDL-QHGARMFY--NNTQDMLWRRKMXXXXXXXXXXXXX---SRRLMGLQLLDVKKHHH-HRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEPSPENGSNPLPTFSAPAAEKHVANGKEFTSCEENINRKDTSLDENNAVPENLEHNLPDSPFASPTKGTGEYFSAFSNNANGTEKD---XXXXXXXXXXXXXXXXXXXASLDMASFKSFNCQMPRFSSGHGAIGM 679 ARDPFD Q GARM N+ +++ RRK+ SRRL+GLQLLD+K H A +T +P+P N F P ++ E P + + + +P+ K V G + S E D+ ++ EHNLPDSPFAS TK T +F+A + A G+E D +LD+ S ++ MPR S HGAIGM Sbjct: 460 ARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPI--TNAFTSG---QPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSD--------QSGEHNLPDSPFASSTKSTA-FFTATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSE-HGAIGM 677 The following BLAST results are available for this feature:
BLAST of EY711458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711458 ID=EY711458; Name=EY711458; organism=Citrus sinensis; type=EST; length=937bpback to top |