EY711456

BLAST of EY711456 vs. ExPASy Swiss-Prot
Match: RPB3A_ARATH (DNA-directed RNA polymerase II subunit RPB3-A OS=Arabidopsis thaliana GN=RPB36A PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.699e-64
Identity = 87/115 (75.65%), Postives = 97/115 (84.35%), Query Frame = 3

Query:  225 NALSLEEKQSWVESSPTKALDIDPNTGQAYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLGLNAIEVLKQKLDAVRLSEDTVEADDQLGELGTHM 569
            + LS EEK   +ESSPTK   +DP T Q  VVD EAYTYD+EVIKKAEAMGKPGL+EI  K+DSFIFTVESTGA+KASQL LNAI++LKQKLDAVRLS+DTVEADDQ GELG HM
Sbjct:  202 DTLSDEEKIDLIESSPTKVFGMDPVTRQVVVVDPEAYTYDEEVIKKAEAMGKPGLIEISPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSDDTVEADDQFGELGAHM 316          

HSP 2 Score: 98.2117 bits (243), Expect = 2.699e-64
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 2

Query:   20 PVDFVDPAGYNSTDHQRGIIIVNLRRGQ*LKLIAIASKGIGKDHAKWSPAATVTFMYEPEIHINEDLME 226
            PVDF   +  + +   +GIIIV LRRGQ LKL AIA KGIGKDHAKWSPAATVTFMYEP+I INED+M+
Sbjct:  134 PVDFTIDSSVSDSSEHKGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAATVTFMYEPDIIINEDMMD 202          

BLAST of EY711456 vs. ExPASy Swiss-Prot
Match: RPB3B_ARATH (DNA-directed RNA polymerase II subunit RPB3-B OS=Arabidopsis thaliana GN=RPB36B PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.017e-63
Identity = 86/115 (74.78%), Postives = 98/115 (85.22%), Query Frame = 3

Query:  225 NALSLEEKQSWVESSPTKALDIDPNTGQAYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLGLNAIEVLKQKLDAVRLSEDTVEADDQLGELGTHM 569
            N L+ EEK   +ESSPTK   IDP TGQ  VVD EAYTYD+EVIKKAEAMGKPGL+EI+ K DSF+FTVESTGA+KASQL LNAI++LKQKLDA+RLS++TVEADDQ GELG HM
Sbjct:  202 NTLTDEEKIDLIESSPTKVFGIDPVTGQVVVVDPEAYTYDEEVIKKAEAMGKPGLIEIHPKHDSFVFTVESTGALKASQLVLNAIDILKQKLDAIRLSDNTVEADDQFGELGAHM 316          

HSP 2 Score: 92.8189 bits (229), Expect = 1.017e-63
Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 2

Query:   20 PVDFVDPAGYNSTDHQRGIIIVNLRRGQ*LKLIAIASKGIGKDHAKWSPAATVTFMYEPEIHINEDLM 223
            PVDF   +  + +   +GIII  LRRGQ LKL A+A KGIGKDHAKWSPAATVT+MYEP+I INE++M
Sbjct:  134 PVDFTSNSSTSDSSEHKGIIIAKLRRGQELKLKALARKGIGKDHAKWSPAATVTYMYEPDIIINEEMM 201          

BLAST of EY711456 vs. ExPASy Swiss-Prot
Match: RPB3_DICDI (DNA-directed RNA polymerase II subunit rpb3 OS=Dictyostelium discoideum GN=polr2c PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.210e-26
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 3

Query:  231 LSLEEKQSWVESSPTKALDIDPN--TGQAYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLGLNAIEVLKQKLDAVR 512
            L+ ++K+ WV S PTK     P+  T Q  + D     Y  E  KKAE+ GKP LV +  K+D FIFTVES+GA+K   + L AI+++K+KL  ++
Sbjct:  199 LTDQQKEEWVGSCPTKVYSYSPHQSTQQVTIEDPLRCVYCLECKKKAESFGKPDLVHLEQKQDKFIFTVESSGALKPEDIVLYAIQIIKRKLTDIQ 294          

HSP 2 Score: 63.5438 bits (153), Expect = 5.210e-26
Identity = 28/58 (48.28%), Postives = 44/58 (75.86%), Query Frame = 2

Query:   53 STDHQRGIIIVNLRRGQ*LKLIAIASKGIGKDHAKWSPAATVTFMYEPEIHINEDLME 226
            S++ ++ I IV LRRGQ +KL AIA KG+GK+HAKWSP+   T+ ++P I +N++ ++
Sbjct:  140 SSNSEQEIPIVKLRRGQEIKLRAIAKKGVGKEHAKWSPSCVATYQFQPIIVLNQNRID 197          

BLAST of EY711456 vs. ExPASy Swiss-Prot
Match: CNJC_TETTH (Conjugation stage-specific protein OS=Tetrahymena thermophila GN=CNJC PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.486e-17
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 3

Query:  231 LSLEEKQSWVESSPTKALDIDPNTGQAYVVDAEAYTYDDEVIKK-AEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLGLNAIEVLKQKLDAVR 512
            L +E+K++ V + PTK   I+P+T    V D     Y +E + K AE   KP L++I  K+D F F VE+TG +K  ++       L+QKLD +R
Sbjct:  200 LDIEQKKALVNACPTKVFGINPHTNTLEVQDHMKCMYCEECVYKCAEDFQKPKLIKIDHKKDKFFFKVETTGVMKPVEVLRRGFSTLRQKLDFMR 294          

HSP 2 Score: 47.7506 bits (112), Expect = 1.486e-17
Identity = 22/50 (44.00%), Postives = 31/50 (62.00%), Query Frame = 2

Query:   71 GIIIVNLRRGQ*LKLIAIASKGIGKDHAKWSPAATVTFMYEPEIHINEDL 220
            GI I+ L +GQ +     A KGIGK H+KW+P    TF  EPEI  ++++
Sbjct:  148 GIPIIKLSKGQQIHFECEAQKGIGKMHSKWNPVCISTFSVEPEIIFDQEI 197          

BLAST of EY711456 vs. ExPASy Swiss-Prot
Match: RPAC1_SCHPO (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Schizosaccharomyces pombe GN=rpc40 PE=2 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 5.800e-11
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 2

Query:   74 IIIVNLRRGQ*LKLIAIASKGIGKDHAKWSPAATVTFMYEPEIHI 208
            I++  LR GQ + L A A  GIG+DHAK+SP AT ++   P IHI
Sbjct:  198 IVVAKLRPGQEIDLEAHAILGIGQDHAKFSPVATASYRLLPTIHI 242          

HSP 2 Score: 41.9726 bits (97), Expect = 5.800e-11
Identity = 27/78 (34.62%), Postives = 40/78 (51.28%), Query Frame = 3

Query:  306 QAYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLGLNAIEVLKQKLDAVRLSEDTVEAD 539
            QA V D    T   E ++  E   K   V++    D ++F+VESTG +K   L + +I VLK K  AV+ S   + +D
Sbjct:  274 QARVADVRKDTVSRECLRHPEFADK---VQLGRVRDHYLFSVESTGIMKPDVLFIKSIAVLKSKCLAVKSSLQNISSD 348