EY711454

Overview
NameEY711454
Unique NameEY711454
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711454 vs. ExPASy Swiss-Prot
Match: NPL42_ARATH (NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.146e-43
Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 3
Query:  315 WTTQTGPYLPSTS---SHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNDTLASAVKRGGIMYGTVVDDTRVDVNFIYEPPHHETGEVLYMLHDDGEAELVDSIAAGLGMKK 749
            +T  T P LP +S    HGS+++L+YDGER++ G P   PAGSFGRKMT+DDLIA+QMRVTRQE  HC+SVSFDRD A+AFQ YVN++LA AVKRGG MYGTV ++ +V+V+FIYEPP   T   L ++ D  E + VD+IA GLGM++
Sbjct:   62 FTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLGMRR 210          

HSP 2 Score: 72.0182 bits (175), Expect = 1.907e-17
Identity = 33/54 (61.11%), Postives = 47/54 (87.04%), Query Frame = 2
Query:  191 VAELKTIMQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMDNPDRPLSSLNI 352
            V++LKT++  QL+IP+  QTLSTN++LLLAK+P+DLL FTD+ +P+ PLSSLN+
Sbjct:   24 VSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNL 77          

HSP 3 Score: 38.5058 bits (88), Expect = 1.907e-17
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  124 MLLRIRSRDGL*RVTVDGAHVT 189
            M+LRIRSRDGL RVT +GAH+T
Sbjct:    2 MMLRIRSRDGLERVTAEGAHIT 23          
BLAST of EY711454 vs. ExPASy Swiss-Prot
Match: NPL41_ARATH (NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.655e-42
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 3
Query:  354 SHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNDTLASAVKRGGIMYGTVVDDTRVDVNFIYEPPHHETGEVLYMLHDDGEAELVDSIAAGLGMKK 749
            +HGS+V+L+Y+GER +RG P+  PAGSFGRKMT++DLIA+QMRV RQE  HC+SVSFDRDCA+AFQ +VN++LA AVKRGG MYG V +D +V+VNFIYEPP     + L ++ D  E + VD+IA GLGM++
Sbjct:   78 AHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNFIYEPPQQGMEDNLILMRDSEEEKRVDAIALGLGMRR 210          

HSP 2 Score: 78.9518 bits (193), Expect = 1.062e-18
Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 2
Query:  191 VAELKTIMQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMDNPDRPLSSLNIVPRLHRFLILR-RRAKRQGPQLQP----GRILRAED 445
            V++LKT++Q QL+IP+ +QTLSTN+NLLLAKSPSD L FTDM +P+  +SSLN+      +L     R  R GP + P    GR +  ED
Sbjct:   24 VSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVED 113          

HSP 3 Score: 35.8094 bits (81), Expect = 1.062e-18
Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  127 LLRIRSRDGL*RVTVDGAHVT 189
            +LR+RSRDGL RV+VDG H+T
Sbjct:    3 MLRVRSRDGLERVSVDGPHIT 23          
BLAST of EY711454 vs. ExPASy Swiss-Prot
Match: NPL4_ORYSJ (NPL4-like protein OS=Oryza sativa subsp. japonica GN=Os01g0377700 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.228e-30
Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 3
Query:  354 SHGSIVFLSYDGERNVRGP----SFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNDTLASAVKRGGIMYGTVVDDTR-VDVNFIYEPPHHETGEVLYMLHDDGEAELVDSIAAGLGMKKGWLI 761
            S+GS V+LSY  +     P    + + AGSFG+KMTMDDLIA+Q+RVTRQE P C + SFDRD A+AFQ +V ++LA A KR G +YG V  DT+ V V+FIYEPP   T +V+ ++ D  E   VD+IA GLGM++  L+
Sbjct:   74 SNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRVTRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDADTKEVFVDFIYEPPQVGTEDVVQLMRDAQEEARVDAIAHGLGMRRVGLV 214          
The following BLAST results are available for this feature:
BLAST of EY711454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NPL42_ARATH1.146e-4359.73NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2... [more]
NPL41_ARATH1.655e-4261.65NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3... [more]
NPL4_ORYSJ4.228e-3051.77NPL4-like protein OS=Oryza sativa subsp. japonica ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-H05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711454 ID=EY711454; Name=EY711454; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGCGGACGCGTGGGATCCCACCGGAGGTAACACACCGACCC
GAAATCACTACTTGTGCTGAAAGAAGCCTCGACCCCTGTTACCTCGATTC
GAAACCCCAAAACCGCACCAAACATGCTGCTTCGCATCCGCAGCAGAGAC
GGCCTCTAGCGCGTCACAGTCGACGGCGCACACGTCACAGGTCGCAGAAC
TGAAAACCATAATGCAATCGCAGCTCCGAATCCCCGTCGAAAGCCAAACC
CTATCCACTAACCAAAACCTCTTATTAGCCAAATCACCCTCCGATCTCCT
CCAATTCACCGACATGGACAACCCAGACAGGCCCTTATCTTCCCTCAACA
TCGTCCCACGGCTCCATCGTTTTCTTATCCTACGACGGCGAGCGAAACGT
CAGGGGCCCCAGCTTCAACCCGGCCGGATCCTTCGGGCGGAAGATGACCA
TGGACGATTTGATCGCCAAACAGATGCGGGTCACCCGCCAGGAGAATCCG
CATTGCGAGTCCGTCTCCTTTGATCGTGACTGCGCCGACGCCTTTCAGCA
GTACGTCAATGATACGCTGGCGTCTGCCGTCAAACGCGGAGGGATCATGT
ACGGCACTGTCGTGGATGATACACGGGTAGATGTGAATTTCATCTACGAG
CCGCCTCATCACGAGACGGGAGAAGTGCTGTATATGTTACATGACGATGG
AGAGGCAGAATTAGTGGACTCGATTGCGGCTGGATTGGGGATGAAGAAAG
GGTGGTTAATTTGCCACAAACGATAATGCAGAACAAGAAGATTATCTTTT
ATCCACAGGGAGGATATCGCAGCGTTGAGTTCCCCCGGGATGCATATGGA
AGAGGGGGTACGGCTGGGAGAAATGGAGGTTAAGAGGAGGGAGTGCCCTT
TCA
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