EY711443

Overview
NameEY711443
Unique NameEY711443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10595 contig Csv1_Contig10595:8..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.305e-52
Identity = 107/171 (62.57%), Postives = 127/171 (74.27%), Query Frame = 1
Query:  166 WVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILI*LENLWPNDHSEPQEIEASVPASSEKSG-STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKEG 675
            WVS + SRI  RKHF++ SSNG PLNAVS+QD +                      VP +   SG +T+SITV+GASGDLAKKKI PALFAL+YEDCLPE+F VFGY+RTKL+DEELRN+IS TLT RIDK+ENC+ KM+ FL+RCFYHSG Y+SE+ FAELD  LKEKEG
Sbjct:   45 WVSGIYSRIQPRKHFEVFSSNGFPLNAVSVQDVQ----------------------VPLTELGSGDTTVSITVIGASGDLAKKKILPALFALFYEDCLPENFVVFGYSRTKLSDEELRNMISTTLTCRIDKRENCDAKMEHFLERCFYHSGQYNSEDDFAELDYKLKEKEG 193          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.445e-49
Identity = 111/185 (60.00%), Postives = 126/185 (68.11%), Query Frame = 1
Query:  118 LFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILI*LENLWPNDHSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKE 672
            LFS  +  PRK  FS    QV+ R  A KH QL +SNG   N  SLQDS            D    + +         K  STLSITVVGASGDLAKKKIFPALFAL+YE CLP+DF+VFGYARTKLT EELR++IS TLT RID++E C DKM+QFLKRCFYHSG Y+SEE FAEL+  LKEKE
Sbjct:   31 LFSRSLTFPRKSLFS----QVRLRFFAEKHSQLDTSNGCATNFASLQDS-----------GDQLTEEHVT--------KGESTLSITVVGASGDLAKKKIFPALFALFYEGCLPQDFSVFGYARTKLTHEELRDMISSTLTCRIDQREKCGDKMEQFLKRCFYHSGQYNSEEDFAELNKKLKEKE 192          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.399e-44
Identity = 99/174 (56.90%), Postives = 122/174 (70.11%), Query Frame = 1
Query:  184 SRIHARKHFQLKSSNGHPLNAVSLQDSEILI*---LENLWPNDH--------SEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKE 672
            S I +RK   L+ +     NAV +QD  +      +EN  P           + P+E + ++   S K+ ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGYAR+K+TD ELRN++SKTLT RIDK+ENC +KM+QFL+RCFYHSG Y S E+FAELD  LKE E
Sbjct:   38 SSILSRKFGSLQINQKPFWNAVRMQDGAVATPPSKIENETPLKKLKNGILPVAPPKEQKDTIDFDSNKAKSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCGEKMEQFLERCFYHSGQYDSLENFAELDKKLKEHE 211          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.021e-43
Identity = 96/176 (54.55%), Postives = 122/176 (69.32%), Query Frame = 1
Query:  223 SNGHPLNAVSLQDSEILI*LENLWPNDHSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKE-GRQEMLISNFGFNKQIYICGKVVLC 747
            SNGHPLN VSLQ+    + +  +         +++      S K   TLSI VVGASGDLAKKKIFPALFAL+YE+CLPE+FTVFG++RT++ DEELR +ISKTLT RID++ENC +KMD FL+RCFYHSG Y+SE+ F+ LD  LKEKE GR +  +        I++   VV C
Sbjct:   42 SNGHPLNDVSLQND---VAVNPIVAKSIDPSADLQLLPLLESVKEEPTLSIIVVGASGDLAKKKIFPALFALFYENCLPENFTVFGFSRTEMNDEELRTMISKTLTCRIDQRENCGEKMDHFLQRCFYHSGQYNSEDDFSGLDCKLKEKEAGRLQNRLFYLSIPPNIFV--DVVRC 212          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD2_ARATH (Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.710e-42
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 1
Query:  343 SSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKE 672
            S  +S ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGY+R+K+TD ELRN++SKTLT RIDK+ NC +KM++FLKRCFYHSG Y S+EHF ELD  LKE E
Sbjct:  102 SDGQSQSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYSRSKMTDVELRNMVSKTLTCRIDKRANCGEKMEEFLKRCFYHSGQYDSQEHFTELDKKLKEHE 211          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD3_ARATH (Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.470e-41
Identity = 80/105 (76.19%), Postives = 91/105 (86.67%), Query Frame = 1
Query:  361 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKEG 675
            ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGYAR+K+TD ELR ++SKTLT RIDK+ NC +KM++FLKRCFYHSG Y S+EHF  LD  LKE EG
Sbjct:  111 STVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRVMVSKTLTCRIDKRANCGEKMEEFLKRCFYHSGQYDSQEHFVALDEKLKEHEG 215          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.481e-25
Identity = 58/124 (46.77%), Postives = 81/124 (65.32%), Query Frame = 1
Query:  313 PQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKEGRQE 684
            P   + S   S  +  ++L I VVGA+G+LA+ KIFPALFALYY   LPED  +FG +R  LTDE+LR++I+ TLT R+D +ENC  KMD F  R +Y +G Y++ +  + L   +K+ EG  E
Sbjct:  136 PVSKQLSDDLSDVRRRASLCIAVVGATGELARGKIFPALFALYYSGYLPEDVAIFGVSRKNLTDEDLRSIIASTLTCRVDHQENCGGKMDAFQSRTYYINGGYNNRDGMSRLAERMKQIEGESE 259          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD5_ARATH (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=ACG9 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.545e-18
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 1
Query:  364 TLSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCE--DKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKE 672
            +LSI V+GASGDLAKKK FPALF L+++  L P++  +FGYAR+K+TDEELR+   K   Y +D+K   +  + + +FLK   Y SG Y SEE F  LD  + E E
Sbjct:   31 SLSIIVLGASGDLAKKKTFPALFNLFHQGFLNPDEVHIFGYARSKITDEELRD---KIRGYLVDEKNASKKTEALSKFLKLIKYVSGPYDSEEGFKRLDKAILEHE 133          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD_MEDSA (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.548e-18
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 1
Query:  286 NLWPNDHSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPED-FTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKE 672
            N W  +  +    E+ V     ++G TLSI V+GASGDLAKKK FPALF LY ++ LP D   +FGYAR+K++D+ELRN +   L           D + +FL+   Y SG Y SE+ F  LD  + E E
Sbjct:    4 NEWHVERRDSIGTESPVAREVLETG-TLSIVVLGASGDLAKKKTFPALFHLYKQELLPPDEVHIFGYARSKISDDELRNKLRSYLVPEKGASPKQLDDVSKFLQLVKYVSGPYDSEDGFRLLDKEISEHE 132          
BLAST of EY711443 vs. ExPASy Swiss-Prot
Match: G6PD_SCHPO (Glucose-6-phosphate 1-dehydrogenase OS=Schizosaccharomyces pombe GN=zwf1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.248e-17
Identity = 45/103 (43.69%), Postives = 72/103 (69.90%), Query Frame = 1
Query:  370 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKEN-CEDKMDQFLKRCFYHSGLYSSEEHFAELDSGLKEKEG 675
            ++ V GASGDL+KKK FPALF+L+ E  LP+D  + GYAR+K+  E+  + I++ +  +ID++++  ++K+++F KRC Y+ G Y   E F  L+S L E+EG
Sbjct:   13 AMVVFGASGDLSKKKTFPALFSLFSEGRLPKDIRIVGYARSKIEHEDFLDRITQNI--KIDEEDSQAKEKLEEFKKRCSYYRGSYDKPEDFEGLNSHLCEREG 113          
The following BLAST results are available for this feature:
BLAST of EY711443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
G6PDC_SOLTU5.305e-5262.57Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD1_ARATH1.445e-4960.00Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PDC_TOBAC1.399e-4456.90Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PDC_SPIOL2.021e-4354.55Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD2_ARATH1.710e-4274.55Glucose-6-phosphate 1-dehydrogenase 2, chloroplast... [more]
G6PD3_ARATH2.470e-4176.19Glucose-6-phosphate 1-dehydrogenase 3, chloroplast... [more]
G6PD4_ARATH2.481e-2546.77Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD5_ARATH6.545e-1850.00Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD_MEDSA8.548e-1843.08Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD_SCHPO3.248e-1743.69Glucose-6-phosphate 1-dehydrogenase OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-G06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711443 ID=EY711443; Name=EY711443; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCGTTTGCTCAATCCTAACTTCTCCACTCCTCTTGATCCC
TAACTGAGCAAGGCTACTTCACATTTGAGTTCTTGTTCTTCTTCATTTGA
AGCATTACAAGACACAACTCTTCAGTGACTTCATTGTTGTCCCAAGAAAA
TATTTTTTCTCCGCTTGGGTATCTCAAGTTCAGTCAAGAATCCATGCTAG
AAAGCATTTTCAGCTTAAATCCTCTAATGGGCATCCTCTCAATGCTGTTT
CTTTGCAAGATAGTGAGATACTGATTTAGCTGGAAAACCTCTGGCCAAAC
GATCATTCCGAGCCTCAAGAGATAGAGGCCTCCGTTCCGGCATCATCTGA
AAAATCGGGTTCTACACTCAGCATAACAGTTGTTGGAGCCTCAGGGGACC
TCGCAAAGAAGAAGATTTTTCCCGCACTTTTCGCACTATACTATGAAGAT
TGTCTGCCTGAGGATTTTACAGTTTTTGGTTATGCTCGGACTAAATTGAC
TGATGAGGAGCTGAGGAACGTGATTAGCAAAACTTTAACTTATAGAATTG
ATAAGAAGGAAAATTGTGAAGACAAAATGGATCAGTTCTTGAAGAGATGC
TTTTACCATTCCGGTCTGTACAGCTCTGAGGAGCATTTTGCAGAATTAGA
CAGCGGACTGAAAGAGAAAGAGGGAAGGCAAGAGATGTTGATATCAAATT
TTGGCTTCAACAAGCAGATTTATATTTGTGGGAAAGTGGTACTCTGCTAA
TCGATGTTAATTGCCGTCTATCCATTGATGACTCTGATCTCGTTTTGTAA
TGGAGAAACTGTCGGGGGNCTGGCATTATTTTGCAGCAGAACCTCTGACG
CATGAATCAGATTAAGGGCNTTNTATATNNATTCAANNCATAAGTATATA
AAATGCTCTTTATTCACTCACAGATT
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