EY711433

Overview
NameEY711433
Unique NameEY711433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711433_ssr48 microsatellite EY711433_ssr48:48..59. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.345e-69
Identity = 133/217 (61.29%), Postives = 154/217 (70.97%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHPFASKTGNSFSNERR----------------SLDFSNQAASNNNLRLQQ-------QGSSYASSTENISRLLEGWMR 657
            MGRPPCCDK+G+KKGPWTPEEDIILVSYIQEHGPGNWR++P+NTGLLRCSKSCRLRWTNYLRPGIKRG+FT HEE MIIHLQALLGN+WAAIASYLP RTDNDIKNYWNTHLKKKL+K QS       P++      N+   + K+ +    ERR                SLD ++ +  +  L   Q       Q S+Y SS ENI+RLLE W +
Sbjct:    1 MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQS-------PENGKCQDGNSSVDSDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLSTVQTTQPRPFQASTY-SSAENIARLLENWKK 209          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.908e-48
Identity = 101/206 (49.03%), Postives = 130/206 (63.11%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKL-----------------------KKFQSAALEPHMPQDSSATSNNTHPFASKTGNSFSNERRSLDFSNQAASNNNLRLQQQGSSYASSTE 624
            MGR PCC+K+G+KKGPWTPEED +LV++IQ HG GNWR++P   GLLRC KSCRLRW NYLRP IKRGNF+  EE  IIHL  LLGN+W+AIA+ LP RTDN+IKN W+THLKK+L                       KK  +AA  P    + SA+S+ T    S   +S + E  +   S+ +AS       ++ SS+ S++E
Sbjct:    1 MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPAQGGHVAASGGKKHKKPKSAKKPAAAAAAPPASPERSASSSVTE---SSMASSVAEEHGNAGISSASAS----VCAKEESSFTSASE 199          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.672e-44
Identity = 81/134 (60.45%), Postives = 100/134 (74.63%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSA 477
            MGR PCC+KVGIK+G WT EED IL +YIQ +G G+WRS+P N GL RC KSCRLRW NYLR  +KRGN TP EE +++ L + LGN+W+ IA +LP RTDN+IKNYWN+HL +KL  F     +P + QD SA
Sbjct:    1 MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNF---IRKPSISQDVSA 131          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.184e-44
Identity = 86/162 (53.09%), Postives = 108/162 (66.67%), Query Frame = 1
Query:   79 GRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQ---------SAALEPHMPQDSSATSNNTHPFASKTGNSFSNER 537
            GR PCC KVG+ +G WTP+ED+ L++YIQ+HG  NWR++P   GLLRC KSCRLRW NYLRP +KRGNFT  EE  II L  LLGNKW+ IA+ LP RTDN+IKN WNTHLKKK+ + +          A      P  S+ +S  TH   + +G S S ++
Sbjct:    4 GRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKKKAGAGSGDAGTPATAPLSSATSSTTTH---NSSGGSDSGDQ 162          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.084e-43
Identity = 89/182 (48.90%), Postives = 111/182 (60.99%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHPFASKTGNSFSNERRSLDFSNQAASNNNLRLQQQGSSYASST 621
            MGR PCC+K    KG WT EED  LV YI+ HG G WRS+P + GLLRC KSCRLRW NYLRP +KRGNFT  E+ +II L +LLGNKW+ IA  LP RTDN+IKNYWNTH+K+KL    S  ++P     +    N +   +S+      N+     FSN A           G+S + +T
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL---LSHGIDP----QTHRQINESKTVSSQVVVPIQNDAVEYSFSNLAVKPKTENSSDNGASTSGTT 175          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.415e-43
Identity = 75/120 (62.50%), Postives = 95/120 (79.17%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQ 435
            MGR PCC+KVG+K+G WT EED +L +YI EHG G+WRS+P N GLLRC KSCRLRW NYLR  +KRGN +  EE +II L A LGN+W+ IAS+LP RTDN+IKNYWN+HL +++  ++
Sbjct:    1 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 120          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.153e-43
Identity = 90/182 (49.45%), Postives = 116/182 (63.74%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHPFASKTGNSFSNERRSLDFSNQAASNNNLRLQQQGSSYASST 621
            MGR PCC+K    KG WT EED  L++YI+ HG G WRS+P   GLLRC KSCRLRW NYLRP +KRGNFT  E+ +II L +LLGNKW+ IA  LP RTDN+IKNYWNTH+K+KL    S  ++P   +  S  S  T   A+ T N+       LDF    +++ N+ +    ++  SS+
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKL---VSRGIDPQTHR--SLNSATTTATATPTVNN-----SCLDFRTSPSNSKNICMPTTDNNNNSSS 172          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.378e-43
Identity = 82/143 (57.34%), Postives = 101/143 (70.63%), Query Frame = 1
Query:   76 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEP--HMPQDSSATSNNTHP 498
            MGR PCC+K    KG WT EED  LV+YI+ HG G WRS+P   GLLRC KSCRLRW NYLRP +KRGNFT  E+ +II L +LLGNKW+ IA  LP RTDN+IKNYWNTH+++KL    +  ++P  H P   S+ S ++ P
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL---INRGIDPTSHRPIQESSASQDSKP 140          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.378e-43
Identity = 91/177 (51.41%), Postives = 112/177 (63.28%), Query Frame = 1
Query:   76 MGRPPCCDK-VGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEP--HMPQ--DSSATSNNTHPFASKTGNSFSNERRSLDFSNQAASNNNLRLQ 591
            MGR PCCD+  G+KKGPW PEED  L +YI E+G GNWRS+P   GL RC KSCRLRW NYLRP I+RG F+  EE  I+ L ALLGNKW+ IA +LP RTDN+IKNYWNTH++KKL +     ++P  H P+  D S   + +   A+   N          F N    NNN  L+
Sbjct:    1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQM---GIDPVTHEPRTNDLSPILDVSQMLAAAINNG--------QFGNNNLLNNNTALE 166          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.024e-43
Identity = 80/136 (58.82%), Postives = 98/136 (72.06%), Query Frame = 1
Query:   88 PCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTH 495
            PCC K+G+K+GPWT EED ILVS+I++ G G WRS+P   GLLRC KSCRLRW NYLRP +KRG  T  EE +I+ L  LLGN+W+ IA  +P RTDN+IKNYWNTHL+KKL + Q    + H P D    +NN H
Sbjct:   16 PCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLR-QGIDPQTHKPLD----ANNIH 146          
The following BLAST results are available for this feature:
BLAST of EY711433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB06_ANTMA3.345e-6961.29Myb-related protein 306 OS=Antirrhinum majus GN=MY... [more]
MYB4_ORYSJ1.908e-4849.03Myb-related protein Myb4 OS=Oryza sativa subsp. ja... [more]
MYB12_ARATH1.672e-4460.45Transcription factor MYB12 OS=Arabidopsis thaliana... [more]
MYB1_MAIZE2.184e-4453.09Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYB6_ARATH1.084e-4348.90Transcription repressor MYB6 OS=Arabidopsis thalia... [more]
MYBP_MAIZE1.415e-4362.50Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
MYB30_ANTMA3.153e-4349.45Myb-related protein 330 OS=Antirrhinum majus GN=MY... [more]
MYB4_ARATH5.378e-4357.34Transcription repressor MYB4 OS=Arabidopsis thalia... [more]
MYB39_ARATH5.378e-4351.41Transcription factor MYB39 OS=Arabidopsis thaliana... [more]
MYB5_ARATH7.024e-4358.82Transcription repressor MYB5 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-F07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711433 ID=EY711433; Name=EY711433; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGAAAAAGAATGACAAGAGATAGTGAAGCCAAATTATCATT
ATTATTATTCTTCGTAGTAGCGGCCATGGGAAGACCTCCTTGCTGTGATA
AAGTTGGAATCAAGAAAGGTCCATGGACCCCTGAAGAAGACATCATTTTA
GTTTCTTATATCCAAGAACATGGTCCAGGAAACTGGAGATCAGTGCCCAC
GAACACAGGGTTGTTAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACTA
ACTACCTCAGACCAGGCATCAAGAGAGGCAATTTCACTCCTCATGAAGAA
GGGATGATCATTCATTTGCAAGCTTTATTGGGTAACAAATGGGCAGCAAT
AGCTTCATATCTGCCACAAAGAACAGACAATGATATAAAGAACTATTGGA
ACACACATCTGAAGAAGAAGCTCAAGAAGTTTCAATCAGCAGCTTTGGAA
CCCCATATGCCTCAAGACTCATCAGCTACCAGTAATAATACTCACCCGTT
TGCGTCAAAGACAGGCAACAGCTTCAGTAATGAAAGAAGGAGCTTAGATT
TTTCCAACCAAGCCGCCTCAAATAATAATCTCAGGCTACAACAACAAGGC
AGCTCCTATGCTTCGAGCACAGAGAACATTTCCCGTCTGCTCGAAGGCTG
GATGAGATCATCACCAAAGACTAGTAGTAATAGTTCCAGCGCACTTCTGA
TCAAAGGAAATGGAATATTTTTGACAATAGAAGCATTGAGAATCGGTTGG
TACTTACAGGGCCGAAGAGGACCAGAGGGTGGTGGGGTGATTTGATTCAA
ATGAGAATTATATCATTTTGTCATTGAGCAGAATTGACAATGTGAATGGA
CAGGCCAGTACTGTGACTCAG
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