EY711380

Overview
NameEY711380
Unique NameEY711380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.932e-71
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            +IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAY+NTTIYPLT+IPLL+YC LPA+CLLT KFI+P++ N  +    SLF
Sbjct:  770 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLF 900          

HSP 2 Score: 45.8246 bits (107), Expect = 1.932e-71
Identity = 32/85 (37.65%), Postives = 41/85 (48.24%), Query Frame = 2
Query:  710 SIFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPSSHSRRT-------RFYWTHMVNGKTSL 940
            SIFATGILE +WS V    W  NEQF V+      +   F    +VLAGI+ N  V S  S           F WT ++   T++
Sbjct:  902 SIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTI 986          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 4.286e-71
Identity = 114/132 (86.36%), Postives = 122/132 (92.42%), Query Frame = 3
Query:  201 LQIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            ++IGWIYGSVTEDILTGFKMHARGWRSIYCMPK PAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY GRLKFLERFAYVNTTIYP+T+IPLLMYCTLPAVCL TN+FI+PQ+ N  +    SLF
Sbjct:  753 MEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLF 884          

HSP 2 Score: 45.8246 bits (107), Expect = 4.286e-71
Identity = 33/85 (38.82%), Postives = 41/85 (48.24%), Query Frame = 2
Query:  710 SIFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPSSHSRRT-------RFYWTHMVNGKTSL 940
            SIFATGILE +WS V    W  NEQF V+      +   F    +VLAGI+ N  V S  S           F WT ++   T+L
Sbjct:  886 SIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTL 970          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.912e-65
Identity = 102/131 (77.86%), Postives = 113/131 (86.26%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            +IGWIYGSVTEDILTGFKMHARGW SIYCMP RP FKGSAPINLSDRLNQVLRWALGSVEIL SRHCPIWYGY GRLK LER AY+NT +YP+T+IPL+ YC LPA+CLLTNKFI+P++ N+       LF
Sbjct:  764 EIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLF 894          

HSP 2 Score: 45.0542 bits (105), Expect = 1.912e-65
Identity = 28/61 (45.90%), Postives = 33/61 (54.10%), Query Frame = 2
Query:  710 SIFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPSSHS 889
            SIFATGILE +WS V    W  NEQF V+      +   F    +VLAGI+ N  V S  S
Sbjct:  896 SIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 956          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.912e-65
Identity = 102/131 (77.86%), Postives = 113/131 (86.26%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            +IGWIYGSVTEDILTGFKMHARGW SIYCMP RP FKGSAPINLSDRLNQVLRWALGSVEIL SRHCPIWYGY GRLK LER AY+NT +YP+T+IPL+ YC LPA+CLLTNKFI+P++ N+       LF
Sbjct:  764 EIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLF 894          

HSP 2 Score: 45.0542 bits (105), Expect = 1.912e-65
Identity = 28/61 (45.90%), Postives = 33/61 (54.10%), Query Frame = 2
Query:  710 SIFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPSSHS 889
            SIFATGILE +WS V    W  NEQF V+      +   F    +VLAGI+ N  V S  S
Sbjct:  896 SIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 956          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.631e-64
Identity = 137/241 (56.85%), Postives = 157/241 (65.15%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF*YFKFVKIDFIP*NSFGWLIFLQITNPCQNRVYFSSFCPSSPLVFWKRSGVLFGTMDGWKTNSSGYW---PRFIPLFAGFQGLLKYLLELNPT-PLSLQATRGERDFTGL 914
            +IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAY+NTTIYPLT+IPLL+YC LPA+CLLT KFI+P++ N              F  I FI                    ++ S F      + W   G+     D W  N   +W        LFA FQGLLK L  ++ +  ++ +A+  E DF  L
Sbjct:  762 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISN--------------FASIWFI-------------------SLFLSIFATGILEMRWSGVGI-----DEWWRNEQ-FWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAEL 963          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.631e-64
Identity = 137/241 (56.85%), Postives = 157/241 (65.15%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF*YFKFVKIDFIP*NSFGWLIFLQITNPCQNRVYFSSFCPSSPLVFWKRSGVLFGTMDGWKTNSSGYW---PRFIPLFAGFQGLLKYLLELNPT-PLSLQATRGERDFTGL 914
            +IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAY+NTTIYPLT+IPLL+YC LPA+CLLT KFI+P++ N              F  I FI                    ++ S F      + W   G+     D W  N   +W        LFA FQGLLK L  ++ +  ++ +A+  E DF  L
Sbjct:  762 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISN--------------FASIWFI-------------------SLFLSIFATGILEMRWSGVGI-----DEWWRNEQ-FWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAEL 963          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.961e-63
Identity = 99/131 (75.57%), Postives = 115/131 (87.79%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            +IGWIYGS+TEDILTGFKMH  GWRSIYC+PKRPAFKGSAP+NLSDRL+QVLRWALGSVEI FS+HCP+WYGYGG LKFLERF+Y+N+ +YP T+IPLL YCTLPA+CLLT KFI P++ N  +    SLF
Sbjct:  781 EIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLF 911          

HSP 2 Score: 41.2022 bits (95), Expect = 2.961e-63
Identity = 29/83 (34.94%), Postives = 39/83 (46.99%), Query Frame = 2
Query:  713 IFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPS------SHSRRTRFYWTHMVNGKTSL 940
            IF TGILE +WS V    W  NEQF V+      +   F    +VLAG++ +  V S        S    F WT ++   T+L
Sbjct:  914 IFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDEEFSELYTFKWTTLLIPPTTL 996          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 6.566e-63
Identity = 104/132 (78.79%), Postives = 115/132 (87.12%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY-GGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            ++GWIYGS+TEDILTGFKMH RGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI FSRH P+WYGY GG+LK+LERFAY NTTIYP T+IPLL YC LPA+CLLT+KFIMP +    +    SLF
Sbjct:  715 ELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLF 846          

HSP 2 Score: 38.1206 bits (87), Expect = 6.566e-63
Identity = 23/58 (39.66%), Postives = 30/58 (51.72%), Query Frame = 2
Query:  710 SIFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSICWFPRS-PQVLAGIEPNSPVPS 880
            SI  TGILE +WS V    W  NEQF V+      +    +   ++LAGI+ N  V S
Sbjct:  848 SIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTS 905          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.225e-62
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            +IGWIYGSVTEDILTGFKMH  GWRSIYC+PK PAFKGSAP+NLSDRL+QVLRWALGSVEI FS HCP+WYGYGG LK LERF+Y+N+ +YP T+IPLL YCTLPA+CLLT KFI P++ N  +    SLF
Sbjct:  782 EIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLF 912          

HSP 2 Score: 43.1282 bits (100), Expect = 3.225e-62
Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = 2
Query:  713 IFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPS------SHSRRTRFYWTHMVNGKTSL 940
            IFATGILE +WS V    W  NEQF V+      +   F    +V+AGI+ +  V S        S    F WT ++   T+L
Sbjct:  915 IFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTL 997          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 4.206e-62
Identity = 96/131 (73.28%), Postives = 116/131 (88.55%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF 596
            +IGWIYGSVTEDILTGFKMH+ GWRS+YC PK PAFKGSAPINLSDRL+QVLRWALGSVEI  SRHCPIWYGYGG LK+LER +Y+N+ +YP T+IPLL+YC+LPA+CLLT KFI+P++ N+ + +  +LF
Sbjct:  759 EIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALF 889          

HSP 2 Score: 40.817 bits (94), Expect = 4.206e-62
Identity = 30/84 (35.71%), Postives = 38/84 (45.24%), Query Frame = 2
Query:  710 SIFATGILEKKWSAVWNHGWVENEQFGVLAAFHPSI-CWFPRSPQVLAGIEPNSPVPS------SHSRRTRFYWTHMVNGKTSL 940
            SI  TGILE +W  V    W  NEQF V+      +   F    +VLAG+E N  V S        S    F WT ++   T+L
Sbjct:  891 SIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 974          
The following BLAST results are available for this feature:
BLAST of EY711380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA8_ORYSJ1.932e-7186.26Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA3_ARATH4.286e-7186.36Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA1_ORYSJ1.912e-6577.86Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI1.912e-6577.86Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA2_ORYSJ1.631e-6456.85Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI1.631e-6456.85Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA6_ORYSJ2.961e-6375.57Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ARATH6.566e-6378.79Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA3_ORYSJ3.225e-6274.81Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA5_ARATH4.206e-6273.28Cellulose synthase A catalytic subunit 5 [UDP-form... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-A12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711380 ID=EY711380; Name=EY711380; organism=Citrus sinensis; type=EST; length=942bp
CACTGGTCATATCTTGTCACTATNCCGGAATTCTTACGTCGACCCACGCG
TCCGCCCACGCGTTCTCCTATTATAATTCCAGTTCATCTGTAAATAATAT
GGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCATTCTC
TTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCTTGCT
CTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTACAGG
ATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCTAAGC
GCCCAGCCTTTAAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCTAAAC
CAAGTGCTTCGGTGGGCTCTAGGTTCTGTGGAAATTCTTTTCAGTCGGCA
CTGTCCTATCTGGTATGGTTATGGTGGTCGATTGAAATTTCTTGAGAGGT
TTGCTTATGTGAACACCACTATCTATCCTCTCACTGCAATTCCTCTTCTC
ATGTATTGCACGCTGCCAGCTGTCTGTCTATTAACGAACAAGTTCATTAT
GCCTCAGGTATTTAATCATTACAATTACATCACTAGTTCACTTTTCTAAT
ATTTCAAGTTTGTGAAAATAGACTTCATACCCTAAAATTCTTTTGGTTGG
CTCATTTTCTTGCAGATTACTAACCCTTGCCAGAATAGGGTTTATTTCTC
CTCTTTCTGTCCATCTTCGCCACTGGTATTCTGGAAAAGAAGTGGAGTGC
TGTTTGGAACCATGGATGGGTGGAAAACGAACAGTTCGGGGTATTGGCCG
CGTTTCATCCCTCTATTTGCTGGTTTCCAAGGTCTCCTCAAGTACTTGCT
GGAATTGAACCCAACTCCCCTGTCCCTTCAAGCCACTCGAGGAGAACGAG
ATTTTACTGGACTCATATGGTAAATGGAAAAACCTCCTTACT
back to top