EY711373

Overview
NameEY711373
Unique NameEY711373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10543 contig Csv1_Contig10543:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711373 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17
Identity = 67/216 (31.02%), Postives = 102/216 (47.22%), Query Frame = 1
Query:   76 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTSIDADGGLPASPRIRFNKDGCLLAXSTNDNGIKILATSDG 723
            ++ H G V  + FS   ++  V +  DD TIK+WDA +G      EGH   V+SV      + Q + S ++DG IK W   +       E  G W  ++A+S DG R+ S   S DG   I  W+ + G   +T +G     +  V F     R  +   D +IK WD  +     +++  GG   S  + F+ DG  +A  ++DN IKI  T+ G
Sbjct: 1047 LEGHGGWVQSVVFSPDGQR--VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVA--FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVAS--GSIDGT--IKIWDAASGTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQS--VAFSPDGQRVASGSSDNTIKIWDTASG 1251          

HSP 2 Score: 77.0258 bits (188), Expect = 1.357e-13
Identity = 61/216 (28.24%), Postives = 96/216 (44.44%), Query Frame = 1
Query:   76 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTSIDADGGLPASPRIRFNKDGCLLAXSTNDNGIKILATSDG 723
            ++ H   V  +AFS   ++  V +  DDKTIK+WD  +G      EGH   V+SV      + + + S + D  IK W   +       E  G    ++A+S DG R+     S   +  I  W+ + G   +T +G     L V  F     R  +   D +IK WD  +     +++  GG   S  + F+ DG  +A  ++D  IKI  T+ G
Sbjct:  837 LEGHGSSVLSVAFSADGQR--VASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVA--FSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV----ASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVA-FSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWS--VAFSPDGQRVASGSDDKTIKIWDTASG 1041          
The following BLAST results are available for this feature:
BLAST of EY711373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HETE1_PODAN7.685e-1731.02Vegetative incompatibility protein HET-E-1 OS=Podo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711373 ID=EY711373; Name=EY711373; organism=Citrus sinensis; type=EST; length=809bp
CCACGCGTCCGCTCAAGGCACATTGTCCAAATCTATTCATATCATGGGGG
AGATGAAGTTCGACAGCACTTGGAGATTGATGCTCACGTTGGTGGAGTAA
ATGATATTGCTTTCTCGCATCCGAATAAGCAACTTTGCGTGATAACCTGT
GGTGATGACAAAACGATAAAGGTGTGGGATGCTACTAATGGTGCGAAGCA
GTATATATTTGAAGGCCACGAGGCTCCTGTTTATTCTGTCTGCCCTCATC
ACAAGGAAAATATCCAGTTCATCTTTTCAACGGCACTTGATGGAAAGATT
AAAGCTTGGTTGTATGACAATTTGGGATCTCGAGTTGATTACGAAGCTCC
TGGCCGCTGGTGCACAACAATGGCCTACAGTGCTGATGGTACAAGGCTCT
TTTCATGCGGGACAAGTAAAGATGGGGAATCATTTATTGTTGAATGGAAT
GAAAGTGAAGGAGCTGTGAAGAGGACCTATCAAGGATTCCGCAAACGATC
TCTGGGTGTTGTTCAGTTTGATACAACTAAAAACAGGTTTTTGGCTGCTG
GTGATGATTTCTCTATTAAATTCTGGGATATGGACAATGTGCAACTTTTG
ACTAGTATTGATGCTGATGGAGGTCTTCCAGCAAGCCCTCGAATCCGCTT
TAACAAGGATGGCTGTCTCTTGGCTNGTTCTACCAATGATAATGGAATCA
AGATTTTGGCNACTTCAGATGGCATTCNGTTGCTGCGTACATTTGAGAAT
CTTTCTTATGATGCATCACGAACATCTGAAAACTCGAGGCCTACGATTAG
CCCAATTTC
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