EY711371

Overview
NameEY711371
Unique NameEY711371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711371 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 60/164 (36.59%), Postives = 75/164 (45.73%), Query Frame = 1
Query:  145 LFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLHDSEILI*LENLWTNDHSEPQEIEASVPASSEKSGSTLNITVGGASGDXXXXXXXXXXXXXYYER*SA*GLTALGNALT*MTGEDLRTCITKLFSYRNGQ*GKCDDEMDGFLKRWFYY 636
            LFS  +  PRK  FS    QV+ R  A KH QL +SNG   N  SL DS   +      T +H               K  STL+ITV GASGD             +YE       +  G A T +T E+LR  I+   + R  Q  KC D+M+ FLKR FY+
Sbjct:   31 LFSRSLTFPRKSLFS----QVRLRFFAEKHSQLDTSNGCATNFASLQDSGDQL------TEEHVT-------------KGESTLSITVVGASGDLAKKKIFPALFALFYEGCLPQDFSVFGYARTKLTHEELRDMISSTLTCRIDQREKCGDKMEQFLKRCFYH 171          
BLAST of EY711371 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.412e-12
Identity = 51/149 (34.23%), Postives = 71/149 (47.65%), Query Frame = 1
Query:  193 WVSQVQSRIHARKHFQLKSSNGHPLNAVSLHDSEILI*LENLWTNDHSEPQEIEASVPASSEKSG-STLNITVGGASGDXXXXXXXXXXXXXYYER*SA*GLTALGNALT*MTGEDLRTCITKLFSYRNGQ*GKCDDEMDGFLKRWFYY 636
            WVS + SRI  RKHF++ SSNG PLNAVS+ D                        VP +   SG +T++ITV GASGD             +YE          G + T ++ E+LR  I+   + R  +   CD +M+ FL+R FY+
Sbjct:   45 WVSGIYSRIQPRKHFEVFSSNGFPLNAVSVQD----------------------VQVPLTELGSGDTTVSITVIGASGDLAKKKILPALFALFYEDCLPENFVVFGYSRTKLSDEELRNMISTTLTCRIDKRENCDAKMEHFLERCFYH 171          
The following BLAST results are available for this feature:
BLAST of EY711371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
G6PD1_ARATH3.717e-1336.59Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PDC_SOLTU1.412e-1234.23Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-A02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711371 ID=EY711371; Name=EY711371; organism=Citrus sinensis; type=EST; length=925bp
CACTGTTCCGAGATTCCCTTCTCGACCCACGCGTCCGCGTTTGCTCTATC
CTCAACTTCTCCACTCCTCTTGATCCCTAACTGAGCAAGGCTACTTCACA
TTTGAGTTCTTGCTCTTCTTCATTTGAAGCATTACAAGACACAACTCTTC
AGTGACTTCATTGTTGTCCCAAGAAAATATTTTTTCTCCGCTTGGGTATC
TCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTTAAATCCT
CTAATGGGCATCCTCTCAATGCTGTTTCTTTGCACGATAGTGAGATACTG
ATTTAGCTGGAAAACCTCTGGACAAACGATCATTCCGAGCCTCAAGAGAT
AGAGGCCTCCGTTCCGGCATCATCTGAAAAATCGGGTTCTACACTCAACA
TAACAGTTGGTGGAGCCTCAGGGGACCTCGCAAAGAAGAAGAAATTTCCC
GCACTCTTCGCACTATACTATGAAAGATAGTCTGCATGAGGACTCACCGC
ACTTGGTAATGCCCTCACCTAAATGACTGGAGAAGACCTAAGGACATGCA
TAACAAAACTTTTCTCTTATAGAAATGGACAATAAGGAAAATGTGACGAC
GAAATGGATGGGTTTTTGAAAAGGTGGTTTTACTATTTCTGGAATAATCA
TATGTTGAGAACATGTTTGCAAAATAAAACGCATACCCGACATACCAAAA
AGGAAATGGCCAGAAACCCAAATATCTATCGCAGGATATCTCAAAATAAT
ATCTTCCCGGTGGGAACACCGGACTCCTGCCTCCCATTGCCGCTGCTCAC
CTCACTATGCTGGATCCTACCTCACTCGTGCGTGTGATAAAAGACTGCCG
CCCGTGATTCATTAAAGATAGAAAAACATGAATAAAGTTAACAAACTAAC
GCCCTCTAATTGAACTCCGAGCTTC
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