EY711362

Overview
NameEY711362
Unique NameEY711362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 2.021e-80
Identity = 137/185 (74.05%), Postives = 158/185 (85.41%), Query Frame = 3
Query:    3 PLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLKRCRTA 557
            PLKS+ED+ EKFK  C+G L+SSPWSELDGLQPETKIINEQLGKIN  GFLTINSQP+VN  +SDS ++GWGGPGGYVYQKAYLEFFCS +KL  LV+KSKA P I++MAVNK  NW +N  ++DVNAVTWGVF AKE+IQPT+VDPASFKVWKDEAFEIWSRSWA+LYPE D SR  L+  + +
Sbjct:  387 PLKSIEDVQEKFKELCIGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGPGGYVYQKAYLEFFCSKDKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAKEVIQPTIVDPASFKVWKDEAFEIWSRSWANLYPEDDPSRKLLEEVKNS 571          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 1.310e-79
Identity = 146/204 (71.57%), Postives = 166/204 (81.37%), Query Frame = 3
Query:    3 PLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLKRCRTAIIWAAWWK*LH-HGDLFAV 611
            PLKSVEDI EKFK  CLG L+SSPWSELDGLQPET+IINEQL K+N KGFLTINSQP+VN ERSDS +VGWGGP GYVYQKAYLEFFCS EKL A+V+K KALP I++MAVNK   W +N  Q DVNAVTWGVF AKEIIQPT+VDPASF VWKDEAFE WSRSWA+LYPE D SRN L+  + +    +  +  + +GD+FAV
Sbjct:  387 PLKSVEDIQEKFKELCLGNLKSSPWSELDGLQPETRIINEQLIKVNSKGFLTINSQPSVNAERSDSPTVGWGGPVGYVYQKAYLEFFCSKEKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAKEIIQPTIVDPASFNVWKDEAFETWSRSWANLYPEADPSRNLLEEVKNSYYLVSLVENDYINGDIFAV 590          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.945e-76
Identity = 140/203 (68.97%), Postives = 164/203 (80.79%), Query Frame = 3
Query:    3 PLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLKRCRTAIIWAAWWK*LH-HGDLFA 608
            P+KSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL KIN KGFLTINSQPAVNGERSDS+SVGWGGPGGYVYQKAYLEFFCS EKL  L++KSKA P ++++AVNK+G   +N+    VNAVTWGVF  KEI+QPTVVD ASF VWKDEAFEIWS+ WA L+PEGDSSR  L + + +    +     + +GDLFA
Sbjct:  387 PVKSVEDINERFMNFCQGKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERSDSTSVGWGGPGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGKEIVQPTVVDSASFMVWKDEAFEIWSKGWACLFPEGDSSREILDKVQKSYFLVSLVDNDYINGDLFA 589          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.827e-74
Identity = 137/207 (66.18%), Postives = 162/207 (78.26%), Query Frame = 3
Query:    3 PLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLKRC-RTAIIWAAWWK*LHHGDLFAVLPI 620
            PLKSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL  IN KGFLTINSQPAVNGE+SDS +VGWGGPGGYVYQKAYLEFFC+ EKL  L++K KA P ++++AVNK+G   +N++   VNAVTWGVF  KEIIQPTVVD ASF VWKDEAFEIW+R W  ++PEGDSSR  L++  +T  + +        GDLFA   I
Sbjct:  387 PLKSVEDISERFTNFCQGKLTSSPWSELDGLQPETKIIDDQLVNINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEFFCAKEKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGKEIIQPTVVDHASFMVWKDEAFEIWTRGWGCMFPEGDSSRELLEKVQKTYYLVSLVDNDYVQGDLFAAFKI 593          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 5.569e-38
Identity = 84/191 (43.98%), Postives = 115/191 (60.21%), Query Frame = 3
Query:    6 LKSVEDIYEKFKNYCLG-------KLRSSPWSELD-GLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPE---KLTALVDKSKALPFISFMAVNKEGNW-KANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLK 542
            ++S ED+   F NY          K+   PW+E + G+QPET +I+EQL   N  G LT+NSQP+VNG  S    VGWG PGGY YQKAYLE F + E   KL  ++++   +  +++ A+NK+  + K N  +T   AVTWGVF   EI QPTVVDP SF+ W+DEA+++W   W   YP+   S   +K
Sbjct:  439 IESFEDVKRVFINYITQAPNADGVKVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPLVGWGKPGGYCYQKAYLECFMTAELSDKLIQIIEREFPVR-VNYHAINKDSTFDKTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFYPKESKSYGVIK 628          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.273e-38
Identity = 84/187 (44.92%), Postives = 110/187 (58.82%), Query Frame = 3
Query:    6 LKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLK 542
            L S E ++E F  Y  G       K+   PW++ + L  ET ++ E+L ++N +G LTINSQP +NG+ S    VGWG  GGYV+QKAYLEFF S E   AL+   K     +++  VN +G    N  +   NAVTWG+F  +EIIQPTVVDP SF  WKDEAF +W   W  LY E   SR  ++
Sbjct:  425 LTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRTIIQ 610          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 7.273e-38
Identity = 84/187 (44.92%), Postives = 110/187 (58.82%), Query Frame = 3
Query:    6 LKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLK 542
            L S E ++E F  Y  G       K+   PW++ + L  ET ++ E+L ++N +G LTINSQP +NG+ S    VGWG  GGYV+QKAYLEFF S E   AL+   K     +++  VN +G    N  +   NAVTWG+F  +EIIQPTVVDP SF  WKDEAF +W   W  LY E   SR  ++
Sbjct:  425 LTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQ 610          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.620e-37
Identity = 90/239 (37.66%), Postives = 128/239 (53.56%), Query Frame = 3
Query:    6 LKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCLKRCRTAIIWAAWWK*LHHGDLFAVLPISK---LSCCIHGITTDSFMVTLYPPE 689
            L S E +++ F ++  G       K+   PW++ + L  ET ++ E+L ++N +G LTINSQP +NG+ S    VGWG  GGYV+QKAYLEFF S E + AL+   K     +++  V+ +G    N  +   NAVTWG+F  +EIIQPTVVDP SF  WKDEAF +W   W  LY E   SR  ++                H + F V  +     L  C+  +  D+F +   PP+
Sbjct:  424 LTSEESVFQVFAHHLSGEPNQNGYKVTCLPWND-EPLAAETSLMKEELLRVNRRGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKKYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYI--------------HDNYFLVNLVDNEFPLDNCLWQVVEDTFELLSRPPQ 647          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.764e-37
Identity = 81/177 (45.76%), Postives = 103/177 (58.19%), Query Frame = 3
Query:    9 KSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRNCL 539
            KS  +I + F  YC  K+ S PWS+L  +  E  +I +QL  +N   FLTINSQPA+NGE+S     GWG P GYV+QK Y+EFF  P  L  L +  K L  +S+   NK G+   N      NAVTWGVF  +EIIQPT+V+  SF  WKDEA+ +    WA+ Y     SR  L
Sbjct:  383 KSYSEIGDLFARYCEKKISSLPWSDLP-ISDEADLIRDQLLSMNRNAFLTINSQPALNGEKSSHPVFGWGPPNGYVFQKPYVEFFVHPSLLNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNREIIQPTIVESTSFLAWKDEAYSL-GMEWANAYSPDSISRKLL 557          
BLAST of EY711362 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.050e-36
Identity = 81/183 (44.26%), Postives = 109/183 (59.56%), Query Frame = 3
Query:    6 LKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSR 530
            L S E ++E F++Y  G       ++   PW++ + L  ET ++ E+L ++N  G LTINSQP +N + S    VGWG  GGYV+QKAYLEFF S E + AL+   K     +++  V+ +G    N  +   NAVTWG+F  +EIIQPTVVDP SF  WKDEAF +W   W  LY E   SR
Sbjct:  424 LTSEESVFEVFEHYLSGEPNRHGYRVTCLPWND-EPLAAETSLMKEELLRVNRLGILTINSQPNINAKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSR 605          
The following BLAST results are available for this feature:
BLAST of EY711362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MTHR1_ARATH2.021e-8074.05Methylenetetrahydrofolate reductase 1 OS=Arabidops... [more]
MTHR2_ARATH1.310e-7971.57Methylenetetrahydrofolate reductase 2 OS=Arabidops... [more]
MTHR_ORYSJ3.945e-7668.97Probable methylenetetrahydrofolate reductase OS=Or... [more]
MTHR1_MAIZE2.827e-7466.18Methylenetetrahydrofolate reductase 1 OS=Zea mays ... [more]
MTHR_CAEEL5.569e-3843.98Probable methylenetetrahydrofolate reductase OS=Ca... [more]
MTHR_MACFA7.273e-3844.92Methylenetetrahydrofolate reductase OS=Macaca fasc... [more]
MTHR_HUMAN7.273e-3844.92Methylenetetrahydrofolate reductase OS=Homo sapien... [more]
MTHR_BOVIN1.620e-3737.66Methylenetetrahydrofolate reductase OS=Bos taurus ... [more]
MTHR1_SCHPO2.764e-3745.76Methylenetetrahydrofolate reductase 1 OS=Schizosac... [more]
MTHR_MOUSE1.050e-3644.26Methylenetetrahydrofolate reductase OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-H01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711362 ID=EY711362; Name=EY711362; organism=Citrus sinensis; type=EST; length=908bp
TCCCCTTGAAAAGTGTTGAAGATATCTATGAAAAATTTAAGAATTACTGC
CTTGGGAAATTGAGAAGCAGTCCTTGGTCAGAGTTAGACGGGCTTCAGCC
AGAGACCAAAATCATAAATGAACAGCTTGGAAAGATCAATGTGAAAGGTT
TCCTCACTATCAACAGCCAGCCGGCAGTCAATGGTGAAAGATCCGATTCA
TCTTCTGTTGGTTGGGGTGGGCCAGGAGGATATGTTTATCAGAAAGCATA
TCTAGAGTTTTTCTGCTCACCAGAGAAGTTGACTGCACTTGTTGACAAAA
GCAAAGCTCTTCCATTCATAAGCTTCATGGCTGTCAACAAAGAAGGAAAC
TGGAAAGCCAATGTTAATCAAACTGATGTGAATGCCGTAACTTGGGGGGT
CTTCCGAGCCAAGGAGATTATCCAACCGACTGTTGTTGACCCTGCCAGCT
TCAAGGTGTGGAAGGATGAGGCATTTGAAATTTGGTCAAGATCATGGGCT
TCATTGTACCCTGAGGGAGACTCATCAAGAAATTGCTTGAAGAGGTGCAG
AACAGCTATTATTTGGGCAGCTTGGTGGAAATGATTACATCATGGGGATC
TTTTTGCTGTTTTGCCGATCTCTAAGTTAAGCTGCTGTATCCATGGGATT
ACAACTGATTCCTTCATGGTCACCTTGTACCCTCCTGAAGCCATTTTGAG
GGTTGCCTTCTCCCAAGTTATTCCAATTGAAATTATCCCAAATTAAAAGC
TTACTGATGTGATAATAAGATGAAAGGGATTTGAAACTCCCTGGAGCTCC
CTGGAATAAATGGCCGCTTTCTTCCATTGAATCCCCCCAACATTTGGCAA
GGAAGTTGCATCCGAAATTGAACCGTACCTAAATTTTTATTCCAAAAAGG
AAACTTTT
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