EY711357

Overview
NameEY711357
Unique NameEY711357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length164
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9021 contig Csv1_Contig9021:24..187. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY711357 vs. ExPASy Swiss-Prot
Match: AROA_RHILW (3-phosphoshikimate 1-carboxyvinyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=aroA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.267e-14
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    5 LDLTLDCMRSFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 163
            +DLT   M++FGA+V+     TWRV PTGY A D+++EPDASAATYLWAAEVL
Sbjct:  203 IDLTTAAMKAFGAKVEKTSPVTWRVEPTGYRAADFIVEPDASAATYLWAAEVL 255          
BLAST of EY711357 vs. ExPASy Swiss-Prot
Match: AROA_RHIEC (3-phosphoshikimate 1-carboxyvinyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=aroA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.267e-14
Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    5 LDLTLDCMRSFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 163
            +DLT   M++FGA+V+     TWRV PTGY A D++IEPDASAATYLWAAEVL
Sbjct:  203 IDLTTAAMKAFGAKVEKTSPVTWRVEPTGYRAADFVIEPDASAATYLWAAEVL 255          
BLAST of EY711357 vs. ExPASy Swiss-Prot
Match: AROA_RHIE6 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Rhizobium etli (strain CIAT 652) GN=aroA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.267e-14
Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    5 LDLTLDCMRSFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 163
            +DLT   M++FGA+V+     TWRV PTGY A D++IEPDASAATYLWAAEVL
Sbjct:  203 IDLTTAAMKAFGARVEKTSPVTWRVEPTGYRAADFVIEPDASAATYLWAAEVL 255          
BLAST of EY711357 vs. ExPASy Swiss-Prot
Match: AROA_PSEU2 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aroA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.606e-13
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    5 LDLTLDCMRSFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 163
            LDLTL  MR+FGA+V  + ++ W+V+ TGY A D+ IEPDASAATYLWAA+ L
Sbjct:  203 LDLTLAAMRAFGAEVQAIGDAAWKVSATGYRATDFHIEPDASAATYLWAAQAL 255          
BLAST of EY711357 vs. ExPASy Swiss-Prot
Match: AROA_PSE14 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aroA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.049e-12
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    5 LDLTLDCMRSFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 163
            +DLTL  M++FGA+V  + E+ W+V+ TGY A D+ IEPDASAATYLWAA+ L
Sbjct:  203 VDLTLAAMQAFGAEVQAIGETAWKVSATGYRATDFHIEPDASAATYLWAAQAL 255          
BLAST of EY711357 vs. ExPASy Swiss-Prot
Match: AROA_PSESM (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pseudomonas syringae pv. tomato GN=aroA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.053e-12
Identity = 31/53 (58.49%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    5 LDLTLDCMRSFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 163
            +DLTL  M++FGA+V  + ++ W+V+ TGY A D+ IEPDASAATYLWAA+ L
Sbjct:  203 VDLTLAAMQAFGAEVQAIGDAAWKVSATGYHATDFHIEPDASAATYLWAAQAL 255          
The following BLAST results are available for this feature:
BLAST of EY711357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AROA_RHILW7.267e-1464.153-phosphoshikimate 1-carboxyvinyltransferase OS=Rh... [more]
AROA_RHIEC7.267e-1466.043-phosphoshikimate 1-carboxyvinyltransferase OS=Rh... [more]
AROA_RHIE67.267e-1466.043-phosphoshikimate 1-carboxyvinyltransferase OS=Rh... [more]
AROA_PSEU23.606e-1362.263-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
AROA_PSE141.049e-1260.383-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
AROA_PSESM3.053e-1258.493-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-G08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711357 ID=EY711357; Name=EY711357; organism=Citrus sinensis; type=EST; length=164bp
TCTCCTCGACCTGACCCTGGACTGCATGCGTTCCTTCGGTGCCCAGGTGG
ACATCGTTGATGAAAGCACCTGGCGCGTGGCCCCGACCGGCTACACCGCC
CACGATTACCTGATCGAACCTGACGCTTCCGCCGCCACCTACTTGTGGGC
TGCCGAAGTGTTGA
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