EY711348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711348 vs. ExPASy Swiss-Prot
Match: IPO5_MOUSE (Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 4.366e-25 Identity = 57/159 (35.85%), Postives = 94/159 (59.12%), Query Frame = 3 Query: 234 VFDQVGEILGTLIKTFKAAFLPFFDELSSYLTPMWGKDKTAEERRIAICIFDDVAEQCREAALKYYETYLPFLLEACNDENQDVRQAAVYGLGVCAEFGGSVVKPLVGEALSRLNVVIRHPNALQPENLMAYDNAVSALGKICQFHRDSIDAAQXVPAW 710 + +V +IL ++ ++K LP+F++L + + + +R+ +CIFDD+ E C A+ KY E ++ +L+ D + +VRQAA YGLGV A+FGG +P +AL L VI+ P A EN+ A +N +SA+GKI +F D ++ + +P W Sbjct: 838 ILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLICPQRPWPDRQWGLCIFDDIVEHCSPASFKYAEYFISPMLQYVCDNSPEVRQAAAYGLGVMAQFGGDNYRPFCTDALPLLVRVIQAPEAKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHW 996
BLAST of EY711348 vs. ExPASy Swiss-Prot
Match: RNBP6_MOUSE (Ran-binding protein 6 OS=Mus musculus GN=Ranbp6 PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 3.696e-24 Identity = 68/221 (30.77%), Postives = 116/221 (52.49%), Query Frame = 3 Query: 234 VFDQVGEILGTLIKTFKAAFLPFFDELSSYLTPMWGKDKTAEERRIAICIFDDVAEQCREAALKYYETYLPFLLEACNDENQDVRQAAVYGLGVCAEFGGSVVKPLVGEALSRLNVVIRHPNALQPENLMAYDNAVSALGKICQFHRDSIDAAQXVPAWXNCFAI----KVI*LRLNCS*TALFNGREVRQ*SSGSPPSYLPKIVSVFAETLVGRSSTEQN 884 + +V +IL +L T+K LP+F++L + + + +R+ +CIFDD+ E C + KY E + +L D N +VRQAA YGLGV A+FGG + L EA+ L VI+ N+ +N++A +N +SA+GKI +F + ++ + +P W + + + LN + + V G S LPKI+S+ AE + + + ++ Sbjct: 846 ILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIESNHPV---VIGPNNSNLPKIISIIAEGKINETISHED 1063
BLAST of EY711348 vs. ExPASy Swiss-Prot
Match: IPO5_HUMAN (Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4) HSP 1 Score: 112.079 bits (279), Expect = 4.827e-24 Identity = 57/159 (35.85%), Postives = 94/159 (59.12%), Query Frame = 3 Query: 234 VFDQVGEILGTLIKTFKAAFLPFFDELSSYLTPMWGKDKTAEERRIAICIFDDVAEQCREAALKYYETYLPFLLEACNDENQDVRQAAVYGLGVCAEFGGSVVKPLVGEALSRLNVVIRHPNALQPENLMAYDNAVSALGKICQFHRDSIDAAQXVPAW 710 + +V +IL ++ ++K LP+F++L + + + +R+ +CIFDDV E C A+ KY E +L +L+ D + +VRQAA YGLGV A++GG +P EAL L VI+ ++ EN+ A +N +SA+GKI +F D ++ + +P W Sbjct: 838 ILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHW 996
BLAST of EY711348 vs. ExPASy Swiss-Prot
Match: RNBP6_HUMAN (Ran-binding protein 6 OS=Homo sapiens GN=RANBP6 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.075e-23 Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 3 Query: 234 VFDQVGEILGTLIKTFKAAFLPFFDELSSYLTPMWGKDKTAEERRIAICIFDDVAEQCREAALKYYETYLPFLLEACNDENQDVRQAAVYGLGVCAEFGGSVVKPLVGEALSRLNVVIRHPNALQPENLMAYDNAVSALGKICQFHRDSIDAAQXVPAW 710 + +V +IL +L T+K LP+F++L + + + +R+ +CIFDD+ E C + KY E + +L D N +VRQAA YGLGV A+FGG + L EA+ L VI+ N+ +N++A +N +SA+GKI +F + ++ + +P W Sbjct: 846 ILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHW 1004
BLAST of EY711348 vs. ExPASy Swiss-Prot
Match: IMB3_SCHPO (Importin subunit beta-3 OS=Schizosaccharomyces pombe GN=sal3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.663e-16 Identity = 58/209 (27.75%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 234 VFDQVGEILGTLIKTFKAAFLPFFDELSSYLTP-MWGKDKTAEERRIAICIFDDVAEQCREAALKYYETYLPFLLEACNDENQDVRQAAVYGLGVCAEFGGSVVKPLVGEALSRLNVVIRHPNALQPENLMAYDNAVSALGKICQFHRDSI-DAAQXVPAWXNCFAIKVI*LRLNCS*TALFNGREVRQ*SSGSPPSYLPKIVSVFAET 854 + +++ + ++K K AF PF++ L Y+ + G D A++ A+C+ DD+ E + Y + +LP+L E ++RQAA YG+GV A+ GG + + AL L ++ P+A E + A +N A+ KIC+F + D + V W N + + T L E+ + + + S +P I+++ AET Sbjct: 843 LLNEINKTFSVVLKIHKTAFCPFWERLLPYMDGFLSGNDTVAKQW--ALCMMDDLIEFTGPDSWNYKDHFLPYLAEGIQSSEPEIRQAASYGIGVAAQHGGELYAEICSSALPALFKMLELPDARDEEQIYATENICVAICKICRFCSQRVQDLDKVVTYWINTLPVTHDEDDAPYAYTFL---AELMEQNHVAVASQMPTIITILAET 1046 The following BLAST results are available for this feature:
BLAST of EY711348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711348 ID=EY711348; Name=EY711348; organism=Citrus sinensis; type=EST; length=946bpback to top |