EY711343

Overview
NameEY711343
Unique NameEY711343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.036e-41
Identity = 94/216 (43.52%), Postives = 131/216 (60.65%), Query Frame = 2
Query:  134 GTRLVVSLRGDESYKELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL*RS 781
            G  L++ +  DE+ KE + +  +   +I+     N     R+  +R+ FE+L +N LN+PVI +  +      +D ++ A                  E P  D  FLR  SF++LQ  R+R +KT+++SCPSCGRTLF+LQ+++  I+ +TSHLPGV IAIMGCIVNGPGEMADADFGYVG  P KIDLYVGK  V++ I    A D L+ L R+
Sbjct:  436 GQPLIIQIT-DETEKEWKEVISLKPQLIILSPSTN-----RLHYSRQFFEWLQQNQLNYPVILNFTYQG--ENEDTILLASMECGSLLCDGLGEGVWLEGP-YDILFLRQLSFSILQAARLRMSKTDFISCPSCGRTLFNLQDVTKRIQSRTSHLPGVKIAIMGCIVNGPGEMADADFGYVGSKPGKIDLYVGKECVEKDIDFADADDRLVNLIRA 642          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.695e-34
Identity = 67/111 (60.36%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  440 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            +D + +   S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  P K+ LY GK +V + +  E A + L+ L
Sbjct:  540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSEIADEKLVQL 650          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.695e-34
Identity = 67/111 (60.36%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  440 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            +D + +   S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  P K+ LY GK +V + +  E A + L+ L
Sbjct:  540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSEIADEKLVQL 650          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.695e-34
Identity = 85/204 (41.67%), Postives = 118/204 (57.84%), Query Frame = 2
Query:  167 ESYKEL-EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            ES+K L E L +I    +L  +   E     +   R+L   LS++   FP++ H  F N    ++ +  +                  + P  +D + +   S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  P K+ LY GK +V + +  E A + L+ L
Sbjct:  456 ESFKGLPETLSEIGIKNVLFSIESKEI----LYDYRKLGSILSQHE--FPILLHGSFSNP---EEALYDSAIGIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEKLVEL 650          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.695e-34
Identity = 85/204 (41.67%), Postives = 118/204 (57.84%), Query Frame = 2
Query:  167 ESYKEL-EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            ES+K L E L +I    +L  +   E     +   R+L   LS++   FP++ H  F N    ++ +  +                  + P  +D + +   S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG  P K+ LY GK +V + +  E A + L+ L
Sbjct:  456 ESFKGLPETLSEIGIKNVLFSIESKEI----LYDYRKLGSILSQHE--FPILLHGSFSNP---EEALYDSAIGIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEKLVEL 650          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 88/243 (36.21%), Postives = 118/243 (48.56%), Query Frame = 2
Query:   98 ELSTGAYKLL-PEGTRLVVSLRGDESYKELE------------ILKDIDATMILHD----LPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            +++TG   L  P+G  +  S+R      E+E            IL +++  + L D     PF   ++  +  ARR F      N + PV         + ++   I                         D    R   F++LQ   +R+T  EY+SCP CGRTLFDL E+S  I+E+T HLPG + IA+MGCIVNGPGEMADADFGYVG  P  IDLYV    VK  + ME A + LI L
Sbjct:  352 DITTGKKDLTSPDGVVIPKSMRSSAIVSEIEKHLRIFYKEDAPILNEMNEELWLSDKTLATPFVYFEVESIYQARRFFAL--RQNYSQPVCLSFSLKANLSKNSAAIDLSIRLGALLLDGLGSCVLFNF--SDLKLARTLGFSILQSANIRSTTVEYISCPGCGRTLFDLPEVSQRIKERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSYVPMENAEEELIQL 590          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 2
Query:  470 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            FN+LQ    R T+ +YVSCPSCGRTL+++QE +A IR+ T HL GV IA+MGCIVNGPGEMADADFGYVGGAP KI+LYV  T VK  I  E A + L+ L
Sbjct:  474 FNILQATGTRLTRADYVSCPSCGRTLYNIQEATARIRKATEHLKGVKIAVMGCIVNGPGEMADADFGYVGGAPNKINLYVKHTPVKFNIPQEEAVERLVDL 574          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_CHLCV (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila caviae GN=ispG PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30
Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = 2
Query:  428 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            + P      +R+ +F+ LQ   +R  KTEY+SCP CGRTLFDL E++  IREKT HL G+ IA+MGCIVNGPGEMAD+DFG+VG     IDLYV  T VK  I ME A + L+ L
Sbjct:  481 DLPNVSLPTVREIAFSTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTTRIREKTKHLVGLKIAVMGCIVNGPGEMADSDFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELVRL 595          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_CHLPN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia pneumoniae GN=ispG PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.149e-30
Identity = 64/102 (62.75%), Postives = 75/102 (73.53%), Query Frame = 2
Query:  467 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            +F  LQ   +R  KTEY+SCP CGRTLFDL+E++  IR++T HLPG+ IAIMGCIVNGPGEMADADFG+VG     IDLYV  T VK  I ME A + LI L
Sbjct:  495 AFGTLQNAGVRLVKTEYISCPMCGRTLFDLEEVTTRIRKRTQHLPGLKIAIMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELIRL 596          
BLAST of EY711343 vs. ExPASy Swiss-Prot
Match: ISPG_CHLAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila abortus GN=ispG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = 2
Query:  428 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPWKIDLYVGKTVVKRGIAMEXATDALIPL 772
            + P      +R+ +F  LQ   +R  KTEY+SCP CGRTLFDL E++  I E+T HL G+ IA+MGCIVNGPGEMADADFG+VG     +DLYV  T VK  I ME A D L+ L
Sbjct:  481 DLPNIPLSTVREIAFGTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTKRIHERTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMVDLYVKHTCVKAHIPMEQAEDELVLL 595          
The following BLAST results are available for this feature:
BLAST of EY711343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ISPG_PARUW3.036e-4143.524-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIN4.695e-3460.364-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIC4.695e-3460.364-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBL4.695e-3441.674-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBJ4.695e-3441.674-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLMU6.345e-3136.214-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_AKKM86.345e-3164.364-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLCV1.846e-3055.654-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLPN3.149e-3062.754-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLAB9.162e-3054.784-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-F05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711343 ID=EY711343; Name=EY711343; organism=Citrus sinensis; type=EST; length=887bp
GAAACGGTTGGTAGATATAAGTATGGGAGTTATAACTCCTTTGTCTGAGC
AGCTAACAAAGCCACTGCCCCACGCCATGGTTCTGGTAAACCTTCAGGAG
TTATCAACTGGTGCATACAAGCTTTTGCCAGAAGGAACACGATTGGTTGT
ATCGTTACGCGGTGACGAATCCTACAAAGAGCTGGAAATCCTCAAAGATA
TTGACGCAACAATGATTCTTCATGATTTACCCTTTAATGAAGATAAAATT
GGCAGAGTACAGGCAGCTAGGAGGCTATTTGAGTATCTATCAGAAAATAA
TCTAAACTTCCCTGTAATTCACCATATTCAGTTTCCGAATGGGATTCACA
GGGACGACTTGGTCATTGGTGCCGGTACCAATGTAGGAGCCCTTTTAGTA
GATGGACTTGGAGATGGTTTGCTGTTAGAAGCCCCAGGACAAGATTTTGA
TTTTCTGAGGGATACATCTTTCAACTTACTACAAGGTTGCAGAATGAGGA
ATACAAAGACGGAGTATGTCTCATGTCCATCATGTGGTAGAACTTTGTTT
GACCTTCAAGAAATAAGTGCAGAGATACGAGAGAAAACATCGCACTTGCC
CGGTGTTTCGATTGCTATCATGGGTTGCATTGTCAATGGTCCTGGAGAGA
TGGCTGATGCAGACTTTGGGTATGTTGGTGGGGCTCCCTGGAAGATTGAC
CTGTATGTCGGGAAGACTGTGGTGAAGCGTGGTATTGCAATGGAGCANGC
CACTGATGCCTTGATCCCACTATAAAGATCACCGGCGCTGGATGGATCCT
CCGCAAAAGAGTAGATAGGTAATTTCCATCACAGAATTACATAAGACTTC
GGTGAGGGAGACCACATCCCCTGCTGTTGAATTTAAG
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