EY711341

Overview
NameEY711341
Unique NameEY711341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:1027..1452. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.975e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 200
            ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA
Sbjct:  326 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.103e-29
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 191
            ATRQVLS+YGNMSSACVLFILDEMRKKS+EE KATTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  331 ATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 393          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.805e-28
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 191
            ATRQVLS+YGNMSSACVLFILDEMRKKS+EE KATTG+GLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  330 ATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGDGLDWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.860e-28
Identity = 60/66 (90.91%), Postives = 61/66 (92.42%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 200
            ATRQVLSEYGNMSSACVLFILDEMRKK  EE +ATTGEGLDWGVLFGFGPGLTVETVVL SVPI A
Sbjct:  328 ATRQVLSEYGNMSSACVLFILDEMRKKCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPINA 393          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.860e-28
Identity = 60/66 (90.91%), Postives = 61/66 (92.42%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 200
            ATRQVLSEYGNMSSACVLFILDEMRK   EE +ATTGEGLDWGVLFGFGPGLTVETVVL SVPIKA
Sbjct:  328 ATRQVLSEYGNMSSACVLFILDEMRKNCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPIKA 393          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.528e-27
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 194
            ATR VLSEYGNMSSACVLFILDEMRK+S E+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.528e-27
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 194
            ATR VLSEYGNMSSACVLFILDEMRK+S E+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.996e-27
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 200
            ATR VLSEYGNMSSACVLFILDEMRK+S E+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  329 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.996e-27
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 200
            ATR VLSEYGNMSSACVLFILDEMRK+S E+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  329 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394          
BLAST of EY711341 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.996e-27
Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 3
Query:    3 ATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 194
            ATR VLSEYGNMSSACVLFILDEMRK+S EE +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEEGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
The following BLAST results are available for this feature:
BLAST of EY711341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CHS2_CITSI2.975e-31100.00Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_PETCR8.103e-2995.24Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS2_DAUCA1.805e-2893.65Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS2_RUTGR6.860e-2890.91Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS1_RUTGR6.860e-2890.91Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHS4_SORBI1.528e-2790.63Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS2_MAIZE1.528e-2790.63Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_ORYSJ1.996e-2787.88Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI1.996e-2787.88Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHS7_SORBI1.996e-2790.63Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-F03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711341 ID=EY711341; Name=EY711341; organism=Citrus sinensis; type=EST; length=426bp
AGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATGTCAAGCGCTTGT
GTCTTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGTTGAGGAAGCGAA
AGCCACCACCGGCGAAGGGCTTGATTGGGGTGTGCTGTTCGGGTTCGGGC
CGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCCCCATCAAAGCT
TGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTAACTTTATGTTG
TATGCTTTCACAGTTGAGTTATTGGTTGATCGTGTGAAGGTTTAGTTTTG
TCAATTGAGTTTAAGGCATCGTGCCTTTTCTCTTATGACGTCACCAAACC
TGGGCAACGCTTTGTGTTTATGCATAAATTCTTGGGAATTTGAGAAAGTA
GTAAATTTGTAAAAAAAAAAAAAAAA
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