EY711339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 84/123 (68.29%), Postives = 100/123 (81.30%), Query Frame = 1 Query: 16 SELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDS--SLLAPGTYYLTEVDSMYRRFYAKKPADVTNCENGSLANGH 378 ++L G RVV+FSYGSG TATMFSL+L++ + PFS+SNI SVM+V GKLK+RHE+ PE FVE MKLMEHRYGAKDFVT+K+ LLAPGTYYL EVDS+YRRFY KK E+GS+ANGH Sbjct: 345 NDLAGKRVVMFSYGSGSTATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKDFVTTKEGIIDLLAPGTYYLKEVDSLYRRFYGKKG------EDGSVANGH 461
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.170e-15 Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 4 STHASELDG*RVVLFSYGSGLTATMFSLKLS-EGRHPFSLSNILS-VMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 S A EL G RV LFSYGSGL ++MFSL++S + SL ++S + ++ +L RH+ PE F + M+ EH + + +L PGT+YL VDS+YRR Y + P Sbjct: 341 SKSAQELAGKRVALFSYGSGLASSMFSLRISSDASAKSSLQRLVSNLSHIKPQLDLRHKVSPEEFAQTMETREHNHHKAPYTPEGSIDVLFPGTWYLESVDSLYRRSYKQVP 452
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.528e-15 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 13 ASELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 A EL G R+ FSYGSGL A+ FS ++S+ P S L SV ++ +L SR PE F E+M E Y +F D+S L PGT+YL VD M+RR YA++P Sbjct: 399 AQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARRP 507
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 5.807e-15 Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 13 ASELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 A EL G R+ FSYGSGL A+ FS ++S+ P S L SV ++ +L SR PE F E+M E Y +F D+S L PGT+YL VD M+RR YA+ P Sbjct: 399 AQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARCP 507
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.905e-15 Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 13 ASELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 A +L G R+ FSYGSGL A+ FS ++S+ P S L S ++ +L SR PE F E+M E Y +F D + L PGT+YL VD +YRR YA++P Sbjct: 399 AQDLAGSRIGAFSYGSGLAASFFSFRVSQDASPGSPLEKLVSSTSDLQKRLASRKRVSPEEFTEIMNQREQYYHKMNFSPPGDKNSLFPGTWYLERVDELYRRKYARRP 507
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14 Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 13 ASELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAK 327 A +L G R+ FSYGSGL A+ +SL++S+ P S L SV ++ +L SR PE F E+M E Y +F D + L PGT+YL VD +YRR YA+ Sbjct: 399 AQDLAGSRIGAFSYGSGLAASFYSLRVSQDASPGSPLEKLVSSVSDLPERLASRKRVSPEEFTEIMNQREQYYHKVNFTPPGDPNSLFPGTWYLERVDELYRRKYAR 505
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS2_HUMAN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.095e-13 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 13 ASELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 A EL G R+ FSYGSGL A+ FS ++S+ P S + L S ++ +L SR PE F E+M E Y +F D++ L PGT+YL VD +RR YA++P Sbjct: 399 AQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRP 507
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12 Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 19 ELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 +L G R+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD +RR YA++P Sbjct: 364 QLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRP 470
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12 Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 19 ELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 333 +L G R+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD +RR YA++P Sbjct: 364 QLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRP 470
BLAST of EY711339 vs. ExPASy Swiss-Prot
Match: HMCS1_RAT (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 19 ELDG*RVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKPA 336 +L G R+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD +RR YA++P+ Sbjct: 364 QLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVDEKHRRTYARRPS 471 The following BLAST results are available for this feature:
BLAST of EY711339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711339 ID=EY711339; Name=EY711339; organism=Citrus sinensis; type=EST; length=620bpback to top |