EY711325

Overview
NameEY711325
Unique NameEY711325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711325 vs. ExPASy Swiss-Prot
Match: GRP2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 34/90 (37.78%), Postives = 58/90 (64.44%), Query Frame = 2 
Query:  332 LIGNKISWKSLILLKGLSFYTSEKTLRAAFERFGELVEGKIIMDKISKRSTGYAFIEYTTEDAASAALKEMNGKIINGWMIVVDVAKTTP 601
            ++G+     + + + GLS+ T + +LR AF  FG++V+ K+I+D+ + RS G+ F+ +  E AA+AA+ EM+GK +NG  I V+ A   P
Sbjct:   26 MLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
The following BLAST results are available for this feature:
BLAST of EY711325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GRP2_ARATH2.677e-1137.78Glycine-rich RNA-binding protein 2, mitochondrial ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711325 ID=EY711325; Name=EY711325; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGCAAATGCTTATTTCCCACGATTGTATAATGATATTTTGC
TTGTGAAATTAGGGATTCAATGGACCCAGTAGCATTAAATAATGCAAATC
CTTTCAAGAAGAAGCAAAGGAATATGTTTCATTTGATTTTATTCCTATTT
CTCCCAACATTTACCTGACTGCAGATTAATGCTTCCTTGACTTCTACCTT
ATATTTGTAATTGATCAACTATACTATGATTTTCTCTTTTGTCAAAGCCT
AACACATTCTTCCCTCTAGTTCATTCTACCTTTTTCCTTATAATTGTTTT
GGGCATAGATTATTCTTTTTTCTTGTTTCTTCTCATTGGCAACAAAATTT
CTTGGAAATCTTTGATTCTGTTAAAAGGCCTTTCGTTTTATACATCTGAG
AAAACCTTACGTGCGGCATTTGAACGCTTTGGAGAACTTGTTGAAGGTAA
AATTATAATGGACAAGATTTCGAAAAGGTCCACAGGGTATGCATTTATCG
AGTACACCACCGAAGATGCAGCTAGTGCTGCTCTCAAAGAGATGAATGGC
AAGATTATCAATGGCTGGATGATAGTTGTTGATGTTGCAAAGACTACACC
GAAGTATAGCAAGGGCCGCCCCAAATATGCAGTCTGAATAGAAAAGAGAC
ACCCACTACCCTACCTGAGTGCGTCCCTGCTACTTTGCGATTGAAGCATG
ATAATGCAATCAGGTGCACCATCTTGGATAAAAACGCCATCTGACCTTTG
GTAATCTCTTTCTACCACTGAAAATCTCTTTCGGGCATCGACAATACATT
AACGATGCATTCAAAATCTTTGCTAGACCAAATGTGGGGAGCTCCGACCC
TGGGCTAATGTAGGTAAGGATCATTGCCTGCAGGGCTATAACCTGAGGGA
AAAAACACGGAAAAGGGCTTCATTTTTGAA
back to top