EY711316

Overview
NameEY711316
Unique NameEY711316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711316_ssr535 microsatellite EY711316_ssr535:535..550. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7102 contig Csv1_Contig7102:647..1502. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.342e-30
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFN 463
            YPC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A W WMTP +  +PS HD  +G W P+ +D  + R P FG   NI+ G   CGQG    + + +  Y  Y D LGVG         L C  Q+++N
Sbjct:  173 YPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTP-QSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGY-----GNNLDCYNQRSYN 313          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.651e-29
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +YYGRG I +  NYNYG  G+A+K DL+N+P+ +  N T++F+ AIW WMTP + ++PS+HD   G W P+  D+ + R P +G   NI+ G   CG G  + +++ V  Y  Y  + GV      P   L C  Q++F
Sbjct:  180 WPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGV-----DPGGNLDCNNQRSF 319          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFN 463
            +PC P  +Y+GRG I + +NYNYG  GEA+  DLLN+PE +  +  ++F+ A+W WMTP +  +PS HD   G W P+  D  + R P +G   NI+ G   CG G  D + N +  Y  Y D+LG+G         L C +Q+ FN
Sbjct:  187 WPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTP-QSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGY-----GSNLDCYDQRPFN 327          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I +NYNYGA G A+  +LLN+P+ +  +A ++F+ A+W WMT  ++ +PSAHD   G W P+  D+   R P FG   NI+ G   C  G    M+N +  Y  Y  +LGV      P   L CA Q+ F
Sbjct:  106 WPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT-AQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGV-----DPGNNLDCANQRPF 245          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFNPNTAPSAAS 490
            +PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    SQPS H    G W PT  D+ + R P +G T NIL G   C  G+  A  + V+ Y  Y D+LGVG    GPN  L C  Q  F+ +   ++A+
Sbjct:  191 WPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVG---YGPN--LDCFGQAPFDGDIMSASAA 339          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFN 463
            +PC PG +YYGRG I I +NYNYG  G A+  +LLN+P+ +  NA ++F++AIW WMT  +  +PS HD   G W P+  D  + R P +G   NI+ G   CG G    + + +  Y  Y  +LGV      P + + C  QK+FN
Sbjct:  186 WPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMT-AQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGV-----SPGDNIDCGNQKSFN 326          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 58/146 (39.73%), Postives = 83/146 (56.85%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A+W WMT  +  +PS+HD     W P+  D  ++R P +GT  NI+ G   CG+G    + + +  +  Y DLLGVG         L C  Q  F
Sbjct:  176 FPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGY-----GNNLDCYSQTPF 315          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 68/156 (43.59%), Postives = 90/156 (57.69%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFNPNTAPSAAS 490
            +PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    SQPS H    G W PT  D+ + R P +G T NIL G   C  G+  A  + V+ Y  Y D+LGVG    GPN  L C  Q  F+     ++A+
Sbjct:  191 WPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVG---YGPN--LDCFGQAPFDGGIMSASAA 339          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 58/146 (39.73%), Postives = 83/146 (56.85%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A+W WMT  +  +PS+HD     W P+  D  ++R P +GT  NI+ G   CG+G    + + +  +  Y DLLGVG         L C  Q  F
Sbjct:  175 FPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGY-----GNNLDCYSQTPF 314          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC  G +YYGRG I I WNYNYG  G A+  DLLN+P+ +  +  ++F+ A+W WMTP +  +PS HD   G W P+  D  + R P +GT  NI+ G   CG+G    + + +  Y  Y D+ G+G       + L C  Q+ F
Sbjct:  168 FPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGY-----GDNLDCYSQRPF 307          
The following BLAST results are available for this feature:
BLAST of EY711316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHI1_THECC5.342e-3040.82Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHIX_PEA2.651e-2940.41Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI9_ORYSJ3.462e-2940.14Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHID_SOLLC4.522e-2941.10Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI7_ORYSJ4.522e-2943.59Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_TOBAC4.522e-2940.14Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHIT_PHAVU5.906e-2939.73Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI7_ORYSI5.906e-2943.59Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI5_PHAVU5.906e-2939.73Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI2_PEA5.906e-2939.04Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-C12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711316 ID=EY711316; Name=EY711316; organism=Citrus sinensis; type=EST; length=884bp
CCCGCGTCCGTACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACT
ATGGCCGAGGTGCTATACCTATATACTGGAACTATAACTATGGAGCCACT
GGGGAAGCATTGAAGGCAGATCTGTTGAATCATCCCGAATACATTGAGCA
GAATGCTACCCTTGCCTTTGAGGCTGCAATTTGGAAGTGGATGACCCCAG
TCAAGAAATCCCAGCCTTCAGCCCATGATGCCTTTGTTGGCAACTGGAAG
CCCACCAAGAATGATACTTTGTCCAAACGGGGACCTAACTTTGGTACCAC
AATGAATATCCTCTATGGTGAGAGCGTATGCGGTCAGGGTGATATTGATG
CTATGAACAACATTGTCTCTCATTACTTGTATTACCTTGATCTGTTGGGT
GTTGGCCGAGAGCAGGCAGGACCTAATGAAGAACTCTCTTGTGCTGAGCA
GAAAGCCTTCAACCCAAACACCGCACCTTCAGCTGCATCTTCTTGAGGAC
GTTTATTGTAGCCAAGCTATTATTGTGGGAGTGACTCTCTCTCTCTCTCT
AGGTGGGTACCATTACAATAAGACTGGGGTTAATTAAACTATTTGTTGTT
AGTTTTTTTTTTTTTTCCATCTTTTCATATATTGCGCAAGGCCAATTACT
GTGTGGATTGGCCTGCCCCTCTTCATTGCCGTTGTAAATTTGAGATTCAT
TTGGGTTTGAAAAATCTCCGTTATATCTGGTTACTTATGTAATGATGACC
CGCATGAACCCCTCGGGTGTTTCAATACCAAAATTGCACAGGATTTGCCT
ATATTTTATTTATTCCGGGAAATCCACCTCCAGTTCCCTTCTAAAAAAAA
AAAAATAAAAAAAAAGGCGGCCCCTCTCAAAGGA
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