EY711310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_TOBAC (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum GN=RPL3 PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.571e-69 Identity = 141/221 (63.80%), Postives = 164/221 (74.21%), Query Frame = 1 Query: 232 TTKRTTTHI----VSMSYEAGIGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**PF-LCNDKRAVPGKPENL 876 T K T+ HI +S S EAG+GVM TKLGMMS+FE FREGNIVTQ+KTEATDGY+AVQ+GYRRVRD+KLTKPE+GHL+KSG+IP+RHLQEFRLQSIDGFE QKL F E+F EGDLVDVSGTTIGKGFQGGIKRHNF+ G MTHGSKSHRQ GSIGA + G G++ + G KIRK ++ K+ + K A+PGKP NL Sbjct: 23 THKPTSLHISKSSISASLEAGVGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNL 243
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3A_ARATH (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana GN=RPL3A PE=1 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 5.053e-68 Identity = 144/238 (60.50%), Postives = 168/238 (70.59%), Query Frame = 1 Query: 175 FRPTRKASIL--ASPKQPLIFTTKRTTTHIVSMSYEAGIGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**PF-LCNDKRAVPGKPENL 876 F P + +S+L +SPK T +VS S EAGIGVMG+KLGMMS+FE FREGNIVTQ+KT ATDGYDAVQIGYRRVRDKKLTKPE GHLQK+G IPMRHLQEFRL +I+GFE QKL F+EIF EGDLVDV+GTTIGKGFQGGIKRH+F+ G MTHGSKSHR GSIGA + G G++ + G KIRK ++ K+ + K A+PGKP NL Sbjct: 28 FLPAKSSSLLIKSSPK----------TRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNL 255
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_MICAN (50S ribosomal protein L3 OS=Microcystis aeruginosa (strain NIES-843) GN=rplC PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.001e-40 Identity = 95/200 (47.50%), Postives = 124/200 (62.00%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 IG++GTKLGM F+ VTQVKT+ TDGY+++Q+GY+ V++K L KP LGHL K+G+ P+RHL E+RL+ + GQ++ +IF EGDLVDV+GTTIG+GF G KRHNF+ G MTHGSK+HR GS GA + G PG+ A + G IRK + K+ L K AVPGKP L Sbjct: 3 IGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEKALNKPLLGHLAKAGVSPLRHLIEYRLEDASAYTLGQEIT-ADIFQEGDLVDVAGTTIGRGFSGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSVVKIDSERNLILIKGAVPGKPGTL 201
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNP2 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.406e-39 Identity = 91/200 (45.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL-**PFLCNDKRAVPGKPENL 876 +G++GTKLGM F+ VTQ+KT TDGY +VQIGY V++K LTKP+LGHL+K+ P+RHL+E+RL + G+E GQ + IF G +VDVSG TIG+GF G KRHNF+ G MTHGSK+HR GS GA + G PG+ A + G +RK ++ ++ L K A+PGK NL Sbjct: 3 LGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEKNLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAIT-ANIFEAGQVVDVSGNTIGRGFAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVVRVDEEKNLLLIKGAIPGKAGNL 201
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_CYAP7 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7424) GN=rplC PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 +G++GTKLGM F+ +TQVKT ATDGY+++QIGY V++K L KP+LGHL+KS P+RHL+E+RL++ ++ G + ++F GDLVDV+G TIG+GF G KRHNF+ G+MTHGSK+HR GS GA + G PG+ A + G IRK + ++ L K AVPGKP NL Sbjct: 3 VGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEKALNKPKLGHLKKSASTPVRHLKEYRLENAADYQLGDGIKV-DLFKPGDLVDVAGKTIGRGFAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTVVQIDTERNLILIKGAVPGKPGNL 201
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_ACAM1 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) GN=rplC PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.449e-38 Identity = 92/198 (46.46%), Postives = 123/198 (62.12%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 +G++GTKLGM F+ + G VTQ+KT TDGY A+QIGY +K LT+PELGHL+KSG P+RHLQE+RL + +E GQ ++ ++F+EG LVD+SGT+IG+GF G KRHNFR G M HGSK+HR GS GA + G PG+ A + G IRK + ++ + K +VPGKP Sbjct: 3 VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKALTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQSIS-ADLFSEGQLVDISGTSIGRGFAGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVRVDAERNVLLIKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_BIGNA (50S ribosomal protein L3, chloroplastic OS=Bigelowiella natans GN=RPL3 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.585e-37 Identity = 86/203 (42.36%), Postives = 120/203 (59.11%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIP-MRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHSGPCI-PGEEDAXKNGRXNXKIRKAQM*KL**PFLCNDKR-------AVPGK 864 +G+MGTK GM +Y++ GN+VTQVKT+ TDGYDAVQ+ Y+ RD+ + PE HL+K G + M+HL+EF++ + F GQ+L EE+F GDLVDVSGT+ GKGFQG I+R + G M+HGSKSHRQ GSIG + + G + A + G ++K + + ND+ +VPGK Sbjct: 89 MGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDRTIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPV------MMVNDEEKYIVVRGSVPGK 285
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_CYAA5 (50S ribosomal protein L3 OS=Cyanothece sp. (strain ATCC 51142) GN=rplC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.613e-37 Identity = 89/200 (44.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 +G++GTKLGM FE +TQ+KT TDGY A+QIGY V++K LTKPELGHL+K P+RHL+E+R+ + G+ + +IFN GDLVD++GT++G+GF G KRHNF+ G+MTHGSK+HR GS GA + G PG++ A + G R Q+ ++ L K AVPGKP L Sbjct: 3 VGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEKALTKPELGHLKKVEASPLRHLKEYRVDDTATYTLGEAVK-ADIFNAGDLVDIAGTSMGRGFAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQVVRVDAERNLLLIKGAVPGKPGGL 201
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_THEEB (50S ribosomal protein L3 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.289e-36 Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 +G++GTKLGM F+ I TQ+KT TDGY A+Q+ Y VR+K L++PE GHL KS PMRHL+EFRL+ + ++ GQ + +IF+ G LVDV GT+IG+GF G KRHNF+ G M HGSK+HR GS GA + G PG+ A + G IRK Q+ ++ L K A+PGKP Sbjct: 3 VGILGTKLGMTQIFDEAGRSVPITVVQAGPCPI-TQIKTPQTDGYTAIQVAYGEVREKNLSRPERGHLNKSQTPPMRHLREFRLEDVSAYQLGQAITV-DIFSPGQLVDVRGTSIGRGFAGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVMRVDPERNLILIKGALPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNY3 (50S ribosomal protein L3 OS=Synechocystis sp. (strain PCC 6803) GN=rplC PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.905e-36 Identity = 89/200 (44.50%), Postives = 120/200 (60.00%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 IG++GTKLGM F+ VTQVKT+ TDGY+A+Q+G+ V++K L+KPELGHL+KS PMRHL+E+RL + G + +IF GDLVDV+G ++G+GF G KRHNFR G MTHGSK+HR GS GA + G PG+ A + G +R+ + ++ L K A+PGKP L Sbjct: 3 IGILGTKLGMTQIFDQESGISIPVTVVQAGPCPVTQVKTQDTDGYNAIQVGFLPVKEKALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQPGDAVT-ADIFQAGDLVDVAGQSMGRGFAGYQKRHNFRRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTVVRVDAERNLLIIKGALPGKPGTL 201 The following BLAST results are available for this feature:
BLAST of EY711310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711310 ID=EY711310; Name=EY711310; organism=Citrus sinensis; type=EST; length=894bpback to top |