EY711278

Overview
NameEY711278
Unique NameEY711278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4159 contig Csv1_Contig4159:168..1054. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY711278 vs. ExPASy Swiss-Prot
Match: ORAV1_MOUSE (Oral cancer overexpressed protein 1 homolog OS=Mus musculus GN=Oraov1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.726e-12
Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 3 
Query:   30 EDIFDSSLNLEQTHLKEGYDEGYAHGLATGKEEAKDVGLKHGFETGEELGFYKGCVDVWNSAIRIAPTRFSARVRKGIKQMEELIEKYPVNDPENESVQEIMEALRLKFRIIRAAFGVKLEYDGYP 407
            +DIFD+ +  ++    EGY EGY  G + G  E K  G+ HG + G E+G Y+G    W   +        +R  K ++ +  L++ +P +DP  E + E ++ +R KFR + +   V+ ++   P
Sbjct:    5 QDIFDAVVMADERFHGEGYQEGYEEGSSLGIVEGKRYGMVHGAKIGSEIGCYRGFALAWKCLLHSGAGEKDSRKMKVVEALIALLQDFPYDDPTYEKLHEDLDRIRGKFRQLCSLLNVQPDFKVTP 130
[Close]
BLAST of EY711278 vs. ExPASy Swiss-Prot
Match: ORAV1_HUMAN (Oral cancer overexpressed protein 1 OS=Homo sapiens GN=ORAOV1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 35/122 (28.69%), Postives = 64/122 (52.46%), Query Frame = 3 
Query:   30 EDIFDSSLNLEQTHLKEGYDEGYAHGLATGKEEAKDVGLKHGFETGEELGFYKGCVDVWNSAIRIAPTRFSARVRKGIKQMEELIEKYPVNDPENESVQEIMEALRLKFRIIRAAFGVKLEY 395
            +DIFD+ +  ++    EGY EGY  G + G  E +  G  HG + G E+G Y+G    W   +    T   +R  K ++ +  +I+K+P +DP  + + E ++ +R KF+   +   V+ ++
Sbjct:    5 QDIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFAFAWKCLLHSCTTEKDSRKMKVLESLIGMIQKFPYDDPTYDKLHEDLDKIRGKFKQFCSLLNVQPDF 126
The following BLAST results are available for this feature:
BLAST of EY711278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ORAV1_MOUSE1.726e-1229.37Oral cancer overexpressed protein 1 homolog OS=Mus... [more]
ORAV1_HUMAN5.023e-1228.69Oral cancer overexpressed protein 1 OS=Homo sapien... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-H06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711278 ID=EY711278; Name=EY711278; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGAAGAATTCCAATTCAATTGAAGACATCTTCGACTCTTCA
CTGAACCTAGAGCAGACACATCTTAAAGAAGGCTACGACGAAGGCTACGC
TCACGGCCTTGCCACCGGAAAAGAAGAGGCCAAAGATGTAGGCCTGAAAC
ACGGTTTTGAAACTGGCGAGGAACTAGGCTTTTACAAGGGCTGTGTCGAT
GTGTGGAACTCCGCTATTCGGATCGCTCCGACCCGGTTCTCGGCTCGGGT
CCGCAAGGGTATCAAGCAAATGGAAGAGTTGATTGAGAAATACCCAGTTA
ACGATCCGGAGAATGAGAGTGTTCAAGAGATCATGGAGGCTTTGAGGCTC
AAATTTAGAATTATTCGGGCTGCTTTCGGTGTGAAATTGGAGTACGACGG
GTACCCTAAACCCATAGAGATTGAGTTTTGAGTCGAAAGCCGGTCTTTTT
ATGTACTGGGTATCGGATAATTTTGGTGATAACGCACGCACAGTTATATT
AATCTTTTTTTTCCCTTTTTTCCTTGGATAATTTGATATGATATAACTAT
AGTCCAAGTATTTGCTTAATTAGTTTGTATTGTAGTATTTTTTTGGGAGT
ACTATGGATTGCCTTGAAGGTTGAAGTTAAGTAAATTTCCAGTAACACTT
CTCTTATCATAGTAACCCATCCATGTGGGCACACATGTGTGCAAAAATGA
AGAGATAATCAGTACATTGAGGTTTTGTGTGTTGGTAAGTATTCTGGGCG
AGTATGATCCATATTGAGTAGACATGAGTTTCTTGCTGGAAACACTTACA
TGTTAGCTATGTTGGTGACATTGTGATGGGACATGTGATGAGTTCCTTGC
ATCACTGATCGAGATGAAATTTTATGGTGAGAAAAT
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