EY711258
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47 Identity = 103/161 (63.98%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENAN-GKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGL-IYTPSLWTLPLFTPPHMRNPSILKHNC---LKDNP 566 MI LFKVKEKQRE A+NA G VKKQSAGELRLH+DISELNLP +CSI+FP+GKDDLMNFEVSI PD+GYY GTFV TFQ SP+YPH APKVKC+TKVYHP I NI R+DW+P L I T LFT P+ +P L H+ L+DNP Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDP--LNHDAAAVLRDNP 159
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.317e-44 Identity = 97/162 (59.88%), Postives = 117/162 (72.22%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGK--TPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGL-IYTPSLWTLPLFTPPHMRNPSILKHNC---LKDNP 566 MI LFKVKEKQRE +++ NG+ + VKKQSAGELRLH+DISELNLPK+C I+FP+GK+DLMNFEV+I PDEGYY+ G FV +FQ S +YPH APKVKC+TKVYHP I NI R+DW+P L I T LFT P+ +P L H L+DNP Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDP--LNHEAAAVLRDNP 160
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28 Identity = 68/145 (46.90%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I F DDL+NF++ I PDEG+Y GG FV +F+ YPH PKVKC+T VYHP I NI R+DW+P L ++ L LF P+ +P Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEFSD-HDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDP 144
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28 Identity = 68/145 (46.90%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I F DDL+NF++ I PDEG+Y GG FV +F+ YPH PKVKC+T VYHP I NI R+DW+P L ++ L LF P+ +P Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEFSD-HDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDP 144
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I+F DDL+NF++ I PDEG+Y G FV +F+ YPH PKVKC+T VYHP I NI R+DW+P L ++ L LF P+ +P Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDP 144
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I+F DDL+NF++ I PDEG+Y G FV +F+ YPH PKVKC+T VYHP I NI R+DW+P L ++ L LF P+ +P Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDP 144
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I+F DDL+NF++ I PDEG+Y G FV +F+ YPH PKVKC+T VYHP I NI R+DW+P L ++ L LF P+ +P Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDP 144
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.567e-25 Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 MIKLF +K+++++ + + + KK SA +LR+ +DI+ELNLP TC+ FP +DL+NF++ I PDEG+Y G FV F+ YPH PKVKC T+VYHP I NI R+DW P L ++ L LF P+ +P Sbjct: 1 MIKLFTLKQQKKDGEQKGSQQ---KKASAAQLRIQKDINELNLPNTCATDFPD-PNDLLNFKLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDP 141
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23 Identity = 62/145 (42.76%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHGKDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 M+K++ +KEKQ A G + KK +A +LR+ +D+SEL+LP T FP +D+MNFE+++ PDEG+Y GG F +F +P +PH PKVKC KVYHP I NI R+DW+P L + L LF P+ +P Sbjct: 1 MLKIWSMKEKQA-----AEGGSAKKKVTAAQLRVQKDLSELSLPSTMKTHFPSA-EDIMNFELTVRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDP 139
BLAST of EY711258 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.732e-17 Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 102 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPHG-KDDLMNFEVSIXPDEGYYVGGTFVVTFQGSPIYPHXAPKVKCQTKVYHP-IST*RERLANIFRKDWEPGLIYTPSLWTLP-LFTPPHMRNP 530 M K++++K+K+ + +NA+G +P ++R+ +D+++L +P T S ++P K ++++ E I PDEGYY GG F Q YPH PKVKC K+YHP I NI R+DW P L L L LF P+ +P Sbjct: 1 MRKIWELKKKEAQKEKNASGISPA------QIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE--IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDP 138 The following BLAST results are available for this feature:
BLAST of EY711258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711258 ID=EY711258; Name=EY711258; organism=Citrus sinensis; type=EST; length=869bpback to top |