EY711233

Overview
NameEY711233
Unique NameEY711233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10474 contig Csv1_Contig10474:115..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY711233 vs. ExPASy Swiss-Prot
Match: EDS5_ARATH (Enhanced disease susceptibility 5 OS=Arabidopsis thaliana GN=EDS5 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.288e-21
Identity = 54/104 (51.92%), Postives = 66/104 (63.46%), Query Frame = 2 
Query:   14 EMHKVLGAYFVALIVTPAILSLEGTLLAGRDLKFVSFSMXXXXXXXXXXXXXXXXXXYGLPGCWYVLVGFQWTRFFLAFQRLLSPTGILYSENVSKHQLEKLKA 325
            EMH++L  +F+AL   P  +SLEGTLLAGRDLKFVS  M                  YGL GCW+VLVGFQW RF L  +RLLSP GIL S+  S + +EK+K+
Sbjct:  439 EMHRLLIPFFMALSALPMTVSLEGTLLAGRDLKFVSSVMSSSFIIGCLTLMFVTRSGYGLLGCWFVLVGFQWGRFGLYLRRLLSPGGILNSDGPSPYTVEKIKS 542
The following BLAST results are available for this feature:
BLAST of EY711233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EDS5_ARATH2.288e-2151.92Enhanced disease susceptibility 5 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-D05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711233 ID=EY711233; Name=EY711233; organism=Citrus sinensis; type=EST; length=598bp
CCACGCGTCCGAAGAGATGCACAAAGTACTGGGAGCATACTTTGTGGCTT
TAATCGTGACACCAGCCATTCTGAGTCTTGAGGGAACGCTGCTAGCTGGA
CGAGATCTAAAATTCGTTAGTTTCTCTATGAGCGGATGTTTTTCATTGGG
ATCTCTAGCACTATTGCTTGTGAGCGGTAAGGGATATGGGTTGCCTGGCT
GCTGGTATGTACTTGTAGGATTTCAGTGGACTCGATTTTTCCTCGCCTTC
CAACGCCTTCTTTCTCCGACTGGTATACTTTACTCCGAAAATGTAAGCAA
GCATCAACTGGAGAAGCTGAAAGCTGCTTAGCTCCATTCTTTGCCTGTGA
ATTAGATGAATTACTGCATAAATGAATGCGTGTCCTCGTTGCCGAAGATA
GTTTTATTGTAATTTCTTGATGCCTCATATGAGACTTGAGACGCACAAGC
TAGGTGTAGCTGTAATATGTTATTCTTACATGGTGTATCATACTTGCTGG
ATCAATTACTGTAATTGTACGCTACACTTCTATCTGCCCCAATCTTCAGG
GAGTAATTGAAAGGAAAACAGCTTCTAATAATTAAAAAAAAAAAAAAA
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