EY711209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711209 vs. ExPASy Swiss-Prot
Match: VPS35_MOUSE (Vacuolar protein sorting-associated protein 35 OS=Mus musculus GN=Vps35 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.871e-41 Identity = 104/270 (38.52%), Postives = 156/270 (57.78%), Query Frame = 1 Query: 13 LVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAAND---SDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV-----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEKGNTQINAAAIQSLIELITAEMQS-ESNSPDPAADAFFASTLRYIQXQKQKSGAVGEKYE 795 LVF++ +L + + E + ++ +K+F +QTI L EL LRL+LQ A AA + + E VAYEF +QA+ LYE+EISDS+AQ+ AI LIIGT +RM F EN + L + ++KLLKKPDQ RAV C+HLFW + + + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+EK N + + LI+ I ++ + ES+ + F +TL +++ +++ + G YE Sbjct: 532 LVFAAYQLAFRYK--ENSQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSL-------QVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSRRESPESEGPIYE 792
BLAST of EY711209 vs. ExPASy Swiss-Prot
Match: VPS35_HUMAN (Vacuolar protein sorting-associated protein 35 OS=Homo sapiens GN=VPS35 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 104/270 (38.52%), Postives = 156/270 (57.78%), Query Frame = 1 Query: 13 LVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAAND---SDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV-----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEKGNTQINAAAIQSLIELITAEMQS-ESNSPDPAADAFFASTLRYIQXQKQKSGAVGEKYE 795 LVF++ +L + + E + ++ +K+F +QTI L EL LRL+LQ A AA + + E VAYEF +QA+ LYE+EISDS+AQ+ AI LIIGT +RM F EN + L + ++KLLKKPDQ RAV C+HLFW + + + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+EK N + + LI+ I ++ + ES+ + F +TL +++ +++ + G YE Sbjct: 532 LVFAAYQLAFRYK--ENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSL-------QVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYE 792
BLAST of EY711209 vs. ExPASy Swiss-Prot
Match: VPS35_BOVIN (Vacuolar protein sorting-associated protein 35 OS=Bos taurus GN=VPS35 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 104/270 (38.52%), Postives = 156/270 (57.78%), Query Frame = 1 Query: 13 LVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAAND---SDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV-----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEKGNTQINAAAIQSLIELITAEMQS-ESNSPDPAADAFFASTLRYIQXQKQKSGAVGEKYE 795 LVF++ +L + + E + ++ +K+F +QTI L EL LRL+LQ A AA + + E VAYEF +QA+ LYE+EISDS+AQ+ AI LIIGT +RM F EN + L + ++KLLKKPDQ RAV C+HLFW + + + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+EK N + + LI+ I ++ + ES+ + F +TL +++ +++ + G YE Sbjct: 532 LVFAAYQLAFRYK--ENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSL-------QVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYE 792
BLAST of EY711209 vs. ExPASy Swiss-Prot
Match: VPS35_SCHPO (Vacuolar protein sorting-associated protein 35 OS=Schizosaccharomyces pombe GN=vps35 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.709e-32 Identity = 80/201 (39.80%), Postives = 116/201 (57.71%), Query Frame = 1 Query: 103 VFQLLNQTIETLY-GVPAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEKGNTQINAAAIQSLIELITAEMQS 690 +++ +N I LY + EL L LYL AE A+ + AYEFFTQA+ +YEE + DS Q + +IIG LQ+ F V++ DTL K T Y++KLLKKPDQC +Y SHL+W +D +D +RVL CL+++L+IA+A S+ LF+ IL +Y Y++++ I A I LI+L M+S Sbjct: 534 LWEFVNTCINVLYKNGDSLELCLALYLSAAEMADQENYPDFAYEFFTQAFSIYEESVLDSELQYQQLLMIIGKLQKTRNFSVDDYDTLITKCTLYASKLLKKPDQCCGIYLASHLWWQVASGEDSRPFQDPKRVLECLQKSLKIADACMDQLT-------SLKLFINILERYFYYYDQHCESIIAKHISGLIDLTEQNMRS 727
BLAST of EY711209 vs. ExPASy Swiss-Prot
Match: VPS35_YEAST (Vacuolar protein sorting-associated protein 35 OS=Saccharomyces cerevisiae GN=VPS35 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 9.633e-30 Identity = 83/237 (35.02%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 55 PEENPFGEEGSTTPKKVFQLLNQTIETLYGV---PAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMH-VFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNM-----------KDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFF---EKGNTQINAAAIQSLIELITAEMQS---ESNS 702 P+ S K++F+ +++ I ++ +L L+L LQCA A+ L ++Y+FF+QA+ ++EE +SDS+ Q+ A+ I +LQ+ ++ D+L + T + +KLLKK DQCRAVY CSHL+W + N+ +DG+RVL CL+R+LR+A++ + S L VEILN+ LY+F ++ T I+ I LIELI ++S E NS Sbjct: 610 PDNKTLLSHYSNLLKQMFKFVSRCINDIFNSCNNSCTDLILKLNLQCAILADQLQLNEISYDFFSQAFTIFEESLSDSKTQLQALIYIAQSLQKTRSLYKEAYYDSLIVRCTLHGSKLLKKQDQCRAVYLCSHLWWATEISNIGEEEGITDNFYRDGKRVLECLQRSLRVADSIMD-------NEQSCELMVEILNRCLYYFIHGDESETHISIKYINGLIELIKTNLKSLKLEDNS 839
BLAST of EY711209 vs. ExPASy Swiss-Prot
Match: VPS35_DICDI (Vacuolar sorting protein 35 OS=Dictyostelium discoideum GN=vps35 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.188e-25 Identity = 81/263 (30.80%), Postives = 137/263 (52.09%), Query Frame = 1 Query: 7 VRLVFSSLKLVRQLQGP--------EENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNM-KDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEKGNTQINAAAIQSLIELITAEMQSESNSPDPAADAFFASTLRYIQXQKQK 768 V LVF SL+ +R + +EN + GS K+F +++TI+ L + +L+ RLYLQ + + L E +A ++++E+I+D +AQV A+ L+I TL + + E ++L + +++LL DQ + + CSHLFWVD+ ++ + VL LK+AL I +SN + G+ FV+ILN+ L++ +K + + L+ELI E+ DPA + +T++YIQ Q K Sbjct: 532 VPLVFCSLRFIRNFKQQVDSGVISLDENKWIAIGS----KIFTFVSETIKALADIKLADLSFRLYLQALQTFDHCGLVSRVKELAIKALLIFQEDIADFKAQVMALQLLISTLNSLSIPNEEIYESLAAQTIKQASRLLLPQDQAKLISTCSHLFWVDNPSRQYQNPDSVLQALKKALSI------ISNESSPGLGT---FVDILNECLFYCDKETDAVPIQFVSDLVELIRTTHVKEA---DPAL-PYLQNTIKYIQSQNYK 777 The following BLAST results are available for this feature:
BLAST of EY711209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711209 ID=EY711209; Name=EY711209; organism=Citrus sinensis; type=EST; length=918bpback to top |