EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_HEVBR (Profilin-3 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.752e-17
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMCDIDGHHLT+AAI+GHDGSVWAQSS+FPQ  P
Sbjct:    1 MSWQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKP 44
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF6_HEVBR (Profilin-6 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.136e-16
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQTYVDDHLMCDIDGH LT+AAI+GHDGSVWAQSS+FPQ
Sbjct:    1 MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQ 41
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF4_HEVBR (Profilin-4 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.136e-16
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQTYVDDHLMCDIDGH LT+AAI+GHDGSVWAQSS+FPQ
Sbjct:    1 MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQ 41
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_PYRCO (Profilin OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMCDIDGHHLT+AAI+GHDGSVWAQSS FP+  P
Sbjct:    1 MSWQAYVDDHLMCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKP 44
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF5_HEVBR (Profilin-5 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQTYVDDHLMCDIDGH LT+AAI+GHDGSVWAQSS FPQ
Sbjct:    1 MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSGFPQ 41
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_LITCN (Profilin OS=Litchi chinensis PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMC+ DG HLT+AAI+GHDGSVWAQS+NFPQ  P
Sbjct:    1 MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKP 44
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROFX_ORYSJ (Profilin LP04 OS=Oryza sativa subsp. japonica GN=Os06g0152100 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+IDG+HLT+AAIVGHDGSVWAQS NFPQ  P
Sbjct:    1 MSWQAYVDDHLMCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKP 44
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROFX_ORYSI (Profilin LP04 OS=Oryza sativa subsp. indica GN=OsI_020954 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+IDG+HLT+AAIVGHDGSVWAQS NFPQ  P
Sbjct:    1 MSWQAYVDDHLMCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKP 44
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_LILLO (Profilin-1 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMCD+DG HLT++AIVGHDGS+WAQS+ FPQ  P
Sbjct:    1 MSWQTYVDDHLMCDVDGQHLTASAIVGHDGSIWAQSAGFPQFKP 44
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROFA_ORYSJ (Profilin-A OS=Oryza sativa subsp. japonica GN=Os10g0323600 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMC+I+GHHLTSAAIVGHDG+VWAQS+ FPQ  P
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLTSAAIVGHDGTVWAQSAAFPQFKP 44
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF3_HEVBR1.752e-1786.36Profilin-3 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF6_HEVBR1.136e-1690.24Profilin-6 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF4_HEVBR1.136e-1690.24Profilin-4 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF_PYRCO1.483e-1684.09Profilin OS=Pyrus communis PE=1 SV=1[more]
PROF5_HEVBR1.483e-1690.24Profilin-5 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF_LITCN3.305e-1681.82Profilin OS=Litchi chinensis PE=1 SV=1[more]
PROFX_ORYSJ3.305e-1684.09Profilin LP04 OS=Oryza sativa subsp. japonica GN=O... [more]
PROFX_ORYSI3.305e-1684.09Profilin LP04 OS=Oryza sativa subsp. indica GN=OsI... [more]
PROF1_LILLO4.316e-1679.55Profilin-1 OS=Lilium longiflorum PE=2 SV=1[more]
PROFA_ORYSJ5.637e-1681.82Profilin-A OS=Oryza sativa subsp. japonica GN=Os10... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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