EY711179

Overview
NameEY711179
Unique NameEY711179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12709 contig Csv1_Contig12709:24..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.164e-39
Identity = 90/182 (49.45%), Postives = 114/182 (62.64%), Query Frame = 2
Query:  362 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSK----HDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNKTL--S*TCRTGRP 877
            VS+ELD KTG +K+T++ YA  +  D    + YE++F+VPSGFG IGAI+V NE  +EM+L+DI L   DG  N  V  + CNSW+  K         KR+FF NK YLP QTP GL+ YR  +L   RG+GTGER+  DR+YDYDVYNDLG+ +         L GNK       CRTGRP
Sbjct:  119 VSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGGNKQFPYPRRCRTGRP 300          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.695e-37
Identity = 82/177 (46.33%), Postives = 113/177 (63.84%), Query Frame = 2
Query:  362 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNK--TLS*TCRTGRPR 880
            VS+ELDPKTG ++  ++ +A     +G     YE++  VP+ FG +GA+LVENEHH+EM++KDI L   G  +  +     SW+HSK D+ + R FFT K YLPSQTP G++  R  EL  LRG+G  ERK ++R+YDYD YNDLGD ++ +  +   L G K       CRTGRP+
Sbjct:  106 VSSELDPKTGRERERVKGFAHMTLKEGT----YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFHERVYDYDTYNDLGDPDKNIDHKRPVL-GTKEHPYPRRCRTGRPK 277          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35
Identity = 85/182 (46.70%), Postives = 113/182 (62.09%), Query Frame = 2
Query:  362 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSKHDNKQ----KRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNKTL--S*TCRTGRP 877
            VS+EL+ KTG  K+T+  YA K+  D  G + YE++F+VP+GFG IGA++V NE  +EM+L+D+ L   DG  N  V  + CNSW+  K    +    KR+FF  K YLP QTP GL+ YR  +L   RGNG G+R+  DR+YDYDVYNDLG+ +         L G+K       CRTGRP
Sbjct:  137 VSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDRVYDYDVYNDLGNPDSNGDLARPVLGGSKQFPYPRRCRTGRP 317          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35
Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  362 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNK-TLS*TCRTGR 874
            +S ++DPKT   K +    ++D+++K  +  +  + Y +EF V S FG  GAI V N+H KE +L+ I ++G   GPV+  CNSW+ S+ D+  KR+ FTN+ YLPS+TP GL+  R  EL  LRGNG GERK  DRIYDYDVYND+G+ +         L G +      CRTGR
Sbjct:  130 MSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAE-RVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELARPTLGGREFPYPRRCRTGR 304          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.233e-35
Identity = 84/179 (46.93%), Postives = 113/179 (63.13%), Query Frame = 2
Query:  362 VSAELDPKTGLD----KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDG--LPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNK-TLS*TCRTGRP 877
            +S ++ P+T       + +I+D+ +K GA GD ++ Y +EF V + FGE GAI V N H++E +L+ IV++G  LP GPV+  CNSW+ S  +   KRVFF+NK YLPS+TP GL+  R  EL  LRG+GTG RK  DRIYDY  YNDLG+ ++        L G K      CRTGRP
Sbjct:  118 ISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGGEKIPYPRRCRTGRP 295          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.515e-35
Identity = 78/177 (44.07%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  362 VSAELDPKTGLDK----STIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNK-TLS*TCRTGRP 877
            VS E DP+ G  K    S +  +  K     +  + Y +EF V +GFGE GA+ V N H +E Y++ IV++G P GP + TCNSW+     ++ +RVFF+N+ YLPS+TP GL+  R  EL  LRG+GTGER+  DR+YDYDVYNDLG+ ++ +      L G +       RTGRP
Sbjct:  106 VSTETDPRKGTPKKSKPSALVGWFDKKDVKAE-RVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGRP 281          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.515e-35
Identity = 78/176 (44.32%), Postives = 111/176 (63.07%), Query Frame = 2
Query:  362 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNKT-LS*TCRTGR 874
            +S +LDPKT L K +    ++D+++K     +  + Y +EF V + FG  GAI V N+H KE +L+ I ++G   GPV+  CNSW+ S+ D+  KR+FFTN+ YLP++TP GL+  R  EL  LRG+G+G RK  DRIYD+DVYNDLG+ ++        L G +      CRTGR
Sbjct:  124 ISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAE-RVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDLGNPDKSSELSRPKLGGKEVPYPRRCRTGR 298          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.737e-34
Identity = 83/177 (46.89%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  362 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNK--TLS*TCRTGRPR 880
            VS+ELDP+TG ++  I    +  G   D    YE+ F+VP+ FG IGA+ V N HH EM L DI +   G     V   C SW+   H    KRVFF    YLPSQTP G++  R  EL ILRG G GERK +DRIYDYDVYNDLG+ +         + G K       CRTGRPR
Sbjct:  120 VSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRELEILRGTGCGERKEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGGKEHPYPRRCRTGRPR 296          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.310e-31
Identity = 66/148 (44.59%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  362 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNG---TGERKTYDRIYDYDVYNDLGD 796
            +SA+ D +      T++DYA+++ A+     +YE EFE+P  FG +GAI ++N++H++++LK + L  LP G +  TC SW+  K  +  KR+FF++K YLPSQTP+ LK+YR  EL  L+G      GE   ++RIYDYDVYND+GD
Sbjct:  111 ISAKTDQRI-----TVEDYAQRVWAEAPDE-KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGD 251          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 2
Query:  440 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGD 796
            G G   Y+  FE  S FG  GA  ++N    E YLK ++L+ +PN G ++  CNSW+++  + K  R+FF N  YLPS+TP  L +YR  EL  +RG+GTGERK +DRIYDYDVYNDLG+
Sbjct:   89 GAGEQAYDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGN 208          
The following BLAST results are available for this feature:
BLAST of EY711179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC1_ORYSJ2.164e-3949.45Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX23_HORVU7.695e-3746.33Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOXC2_ORYSJ1.451e-3546.70Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX4_ARATH2.475e-3544.89Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ORYSJ3.233e-3546.93Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX5_ORYSJ5.515e-3544.07Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX3_ARATH5.515e-3544.32Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX21_HORVU2.737e-3446.89Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX2_ARATH6.310e-3144.59Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX4_SOYBN7.713e-2950.00Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-G05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711179 ID=EY711179; Name=EY711179; organism=Citrus sinensis; type=EST; length=885bp
AATAATTCTAAAGCATCTTCTTCTTACTTGAAAAACAATGTTGAAGCCAC
AGGTTCATCAACCTCAATCTATCAAACCCCTATTTCCATTATCCAAGCCG
TTTCTCCATGGAAATTACGGCCATGCCTTTCGTCCAGTTCAATCAACTTC
TACACTTTTTAAAGGAAGTCCCAAACTTCGGATTGGTTCTGTTCCCAGAA
ACACTATCAAAGCTATAGCAACTTCCACTGAAAAATCAATCAAAGTTAAG
GCTGTTGTTACTGTGAAACCAACTGTGGGAGGCTTCCTCTCAAATATTTC
TTTAGACCAAGGGTTAGATGATCTTGGAGATTTGTTTGGTAAATCACTCC
TCTTGGAGCTTGTCAGTGCTGAGCTTGACCCCAAGACGGGATTGGATAAA
TCCACCATCCAAGATTATGCGCGCAAAATTGGTGCGGACGGGGATGGAAA
CATGCAATATGAATCAGAATTCGAAGTCCCATCTGGATTTGGAGAAATTG
GCGCAATATTAGTGGAAAATGAGCACCACAAAGAGATGTATTTGAAAGAT
ATTGTTCTTGATGGTTTGCCAAATGGTCCTGTCAACGTAACATGTAATTC
ATGGCTTCACTCAAAGCACGACAATAAACAAAAGAGAGTTTTCTTTACCA
ACAAGTTGTACTTGCCATCACAAACACCAGACGGATTGAAGAGATATAGA
GCTGANGAGCTTACCATTTTGCGAGGTAATGGGACAGGAGAGCGCAAAAC
CTATGATAGAATCTATGATTATGATGTCTACAATGATCTTGGAGATCAGA
ACAGAAANCTGAANTAGCAAGGNCTGTGCTTGGNAGGCAACAAAACCCTA
TCCTAGACGTGCAGAACTGGACGCCCACGTGTGAC
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