EY711169

Overview
NameEY711169
Unique NameEY711169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE3_ARATH (UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.766e-30
Identity = 47/83 (56.63%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGA 703
            +++GT+TLL  MA   CK+  F+SS TVYGW +   CTE+ PI A +PY R  LFIEEICRDV   DS WKIILL Y    GA
Sbjct:  105 NIVGTVTLLEVMAQYGCKNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA 187          

HSP 2 Score: 60.4622 bits (145), Expect = 1.766e-30
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 3
Query:  216 GWITTDVNDYLDHASEISVDSVT*LAGCRGHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDD 455
            G  +  V D  D++S  S+  V  LAG  G+ ++F  +DL + PA+E +F+ +  DAV+HFAGLKA G  V KPLL+ ++
Sbjct:   25 GGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNN 104          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE2_ARATH (UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 8.604e-30
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGA 703
            +L+GT+TLL  MA   CK+  F+SS TVYG  +   CTE++PI A++PY R  LFIEEICRDV+  D  WKIILL Y    GA
Sbjct:  106 NLVGTITLLEVMAQHGCKNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRYFNPVGA 188          

HSP 2 Score: 58.9214 bits (141), Expect = 8.604e-30
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  216 GWITTDVNDYLDHASEISVDSVT*LAGCRGHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDDILL 464
            G  +  V D LD++S +S+  V  LA   G  ++F  +DL +  A+E +F+ +  DAV+HFAGLKA G  V KPLL+ ++ L+
Sbjct:   26 GGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLV 108          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE2_CYATE (UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.411e-27
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGA 703
            +LIGT+ L   MA+  CK   F+SS TVYG  +   CTE++P+ A +PY R  L IEEICRD++  +  WKIILL Y    GA
Sbjct:  106 NLIGTIVLFEVMAAHGCKKLVFSSSATVYGLPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIYRAEQEWKIILLRYFNPVGA 188          

HSP 2 Score: 59.6918 bits (143), Expect = 1.411e-27
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  234 VNDYLDHASEISVDSVT*LAGCRGHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDDILL 464
            V D LD++SE ++  V  LAG     ++F  LDL +  A+E +F+ +  D+V+HFAGLKA G  V KPLL+ D+ L+
Sbjct:   32 VVDNLDNSSETAIHRVKELAGKFAGNLSFHKLDLRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLI 108          

HSP 3 Score: 21.1718 bits (43), Expect = 1.411e-27
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2
Query:  158 LLTGGVGYLG 187
            L+TGG GY+G
Sbjct:    7 LVTGGAGYIG 16          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.518e-20
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGASTAWKI 721
            +L+GT+ L   MA   CK   F+SS TVYG  E   C ED+ + AM+PY R  LF+EEI RD+   +  W+I+LL Y    GA  + K+
Sbjct:  109 NLVGTINLYEVMAKHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRYFNPVGAHESGKL 197          

HSP 2 Score: 40.4318 bits (93), Expect = 3.518e-20
Identity = 22/45 (48.89%), Postives = 28/45 (62.22%), Query Frame = 3
Query:  330 DLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDDILL 464
            DL N   +E LF+ S  DAV+HFAGLKA G  V  P  + D+ L+
Sbjct:   67 DLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLV 111          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE1_ARATH (UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.006e-19
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGASTAWKI 721
            +L+GT+ L  +MA   CK   F+SS TVYG  E   C ED+ + AM+PY R  LF+EEI RD+   +  W+IILL Y    GA  +  I
Sbjct:  110 NLVGTINLYETMAKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLRYFNPVGAHESGSI 198          

HSP 2 Score: 39.6614 bits (91), Expect = 1.006e-19
Identity = 29/76 (38.16%), Postives = 39/76 (51.32%), Query Frame = 3
Query:  240 DYLDHASEISVDSVT*LAGCR-GHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDDILL 464
            D  D++   +VD V  L G      + F   DL N   +E LF+    DAV+HFAGLKA G  V  P  + D+ L+
Sbjct:   37 DNFDNSVIEAVDRVRELVGPDLSKKLDFNLGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLV 112          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE1_CYATE (UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.444e-16
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGASTAWKI 721
            +L+ T+ L   M+   CK    +SS TVYG  +   C ED  + AM+PY R  LF+EE+ RD+   ++ W+IILL Y    GA  + +I
Sbjct:  113 NLVATINLFQVMSKFNCKKLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWRIILLRYFNPVGAHESGQI 201          

HSP 2 Score: 36.5798 bits (83), Expect = 3.444e-16
Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 3
Query:  330 DLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDDILL 464
            DL N   +++LF+ +  DAV+HFAGLK  G  V  P  + D+ L+
Sbjct:   71 DLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLV 115          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE_DICDI (UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.647e-15
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMSPYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGA 703
            ++ GTLTLL  M     K   F+SS TVYG       TED+P+ A +PY R  L++E I +D+ + D  W  I+L Y    GA
Sbjct:  105 NIAGTLTLLNLMDKHRVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFNPVGA 187          

HSP 2 Score: 39.2762 bits (90), Expect = 3.647e-15
Identity = 20/70 (28.57%), Postives = 40/70 (57.14%), Query Frame = 3
Query:  246 LDHASEISVDSVT*LAGCRGHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPLLHVDD 455
            +D+ S  S++++  +    G  + F  +D++N  A++ +F    + +V+HFAGLKA G     PL + ++
Sbjct:   35 VDNLSNSSLEAIKRVESITGKEIEFHHVDIMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNN 104          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE_MOUSE (UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 1.946e-12
Identity = 32/90 (35.56%), Postives = 47/90 (52.22%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMS-PYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGASTAWKI 721
            +L GT+ LL  M +   K+  F+SS TVYG  +     E +P    + PY +   FIEE+ RD+   D+ W  +LL Y    GA  + +I
Sbjct:  107 NLTGTIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLLRYFNPIGAHASGRI 196          

HSP 2 Score: 40.0466 bits (92), Expect = 1.946e-12
Identity = 21/46 (45.65%), Postives = 28/46 (60.87%), Query Frame = 3
Query:  303 GHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPL 440
            G  + F  +D+L+  A++ LF      AV+HFAGLKA G  V KPL
Sbjct:   56 GRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPL 101          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE_PONAB (UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 1.210e-11
Identity = 31/84 (36.90%), Postives = 43/84 (51.19%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMS-PYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGA 703
            +L GT+ LL  M +   K+  F+SS TVYG  +     E +P    + PY +   FIEE+ RD+   D  W  +LL Y    GA
Sbjct:  108 NLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGA 191          

HSP 2 Score: 38.891 bits (89), Expect = 1.210e-11
Identity = 21/46 (45.65%), Postives = 28/46 (60.87%), Query Frame = 3
Query:  303 GHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPL 440
            G  + F  +D+L+  A++ LF      AV+HFAGLKA G  V KPL
Sbjct:   57 GRSVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPL 102          
BLAST of EY711169 vs. ExPASy Swiss-Prot
Match: GALE_HUMAN (UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2)

HSP 1 Score: 49.6766 bits (117), Expect = 1.571e-11
Identity = 31/84 (36.90%), Postives = 43/84 (51.19%), Query Frame = 2
Query:  455 HLIGTLTLL*SMASPVCKHSDFASSTTVYGWTEVDSCTEDYPI*AMS-PYRRHLLFIEEICRDVFSYDSRWKIILLTYLXACGA 703
            +L GT+ LL  M +   K+  F+SS TVYG  +     E +P    + PY +   FIEE+ RD+   D  W  +LL Y    GA
Sbjct:  108 NLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGA 191          

HSP 2 Score: 38.5058 bits (88), Expect = 1.571e-11
Identity = 21/46 (45.65%), Postives = 28/46 (60.87%), Query Frame = 3
Query:  303 GHCMTFR*LDLLNTPAVEVLFAISMVDAVLHFAGLKAGGVIVHKPL 440
            G  + F  +D+L+  A++ LF      AV+HFAGLKA G  V KPL
Sbjct:   57 GRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPL 102          
The following BLAST results are available for this feature:
BLAST of EY711169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GALE3_ARATH1.766e-3056.63UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana ... [more]
GALE2_ARATH8.604e-3055.42UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana ... [more]
GALE2_CYATE1.411e-2749.40UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetrag... [more]
GALE1_PEA3.518e-2043.82UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE P... [more]
GALE1_ARATH1.006e-1944.94UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana ... [more]
GALE1_CYATE3.444e-1639.33UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetrag... [more]
GALE_DICDI3.647e-1540.96UDP-glucose 4-epimerase OS=Dictyostelium discoideu... [more]
GALE_MOUSE1.946e-1235.56UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE... [more]
GALE_PONAB1.210e-1136.90UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE... [more]
GALE_HUMAN1.571e-1136.90UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-F05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711169 ID=EY711169; Name=EY711169; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGATATTTCTCTGATCGCGAGGTCTAGCTCAGTCTCATCTC
TTCCTTCTGAATTCCCCCGCTTCTTCAATTTTTCGCGCACGTTGTTCCTT
TTTTTTTTTGGTGCTTCTGATTGGTCTCTACCGCTAGACTCCGTGGTTAA
AAACTTTTTGTTGACCGGGGGCGTCGGGTACCTTGGACATGCTCACCCTG
CTTGTCTCGCTGCTAGGATGGATCACAACTGACGTCAATGACTATCTGGA
TCATGCCTCGGAGATCTCCGTCGACTCAGTCACATAACTCGCTGGCTGTC
GAGGTCACTGCATGACCTTTAGATAATTGGATCTCCTAAACACACCAGCT
GTGGAAGTCTTGTTTGCCATATCGATGGTCGATGCTGTCCTCCATTTTGC
TGGACTGAAAGCAGGAGGGGTGATTGTGCACAAACCATTGCTGCATGTTG
ACGACATCTTATTGGAACCCTCACTCTCTTGTGATCTATGGCATCACCTG
TCTGCAAGCACTCGGACTTTGCATCATCCACTACTGTATATGGGTGGACA
GAAGTGGATTCGTGTACAGAAGATTATCCGATCTAGGCAATGAGCCCTTA
TAGACGTCACCTGCTTTTCATTGAAGAGATTTGCCGTGACGTCTTCAGCT
ACGACTCTAGATGGAAGATCATATTGCTGACATATCTCNATGCCTGTGGA
GCATCTACTGCGTGGAAAATTTGCTGATGCATCCCGTGGCATNCGAGACA
ATGTCATGCGCTGCGTCAATCATATTGCTGCTGGTAGGAGGCATGACTGA
CTTGAGTGGGAACTGATTATCAACTAGCGATGCACATGGGTCCGTGATAC
ATCCTGATCTCACTGACTTGCGGGCACTTGCTCATGAATAAACTGATGAA
CTTATAAAGTTGTGGGGAAAACTTGG
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