EY711164

Overview
NameEY711164
Unique NameEY711164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711164_ssr142 microsatellite EY711164_ssr142:142..159. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR60_ARATH (Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.332e-74
Identity = 137/211 (64.93%), Postives = 152/211 (72.04%), Query Frame = 2
Query:  173 VFGGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYS------YGKSSN 787
            VFGGC+QQK++P+SAYE             ATYSSYNNFTIMGSS  D   GL+QCRGDLSMPDCATCVARAV+QVG LC   CGGALQL GCY+KYDN +FLG EDKTVV KKCG S GY  D + RRDAVL  L+   G +R GG+ DV G+  CVGDLT  ECQDCL  AIGRL+NDCGTA +GDMF  KCY RYS      Y KS N
Sbjct:   38 VFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTARGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGSSEGYNTDGISRRDAVLTELVNGGGYFRAGGSGDVQGMGQCVGDLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYSTDGAQHYAKSHN 248          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR12_ARATH (Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 3.184e-60
Identity = 115/203 (56.65%), Postives = 141/203 (69.46%), Query Frame = 2
Query:  173 VFGGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMG-SSPQDVVYGLYQCRGDLSMP--DCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTAS-GPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYS 769
            ++GGC+Q+KY P S YE             A+  +YNNFT  G S     VYGLYQCRGDLS    DCA CVARAV+++G LC    GGALQL+GC+VKYDN TFLGVEDKTVV ++CGP VGY  D M RRD+V+  L  +S G YRVG + ++ G+A C GDL+A ECQDCL++AIGRL  DCG A +GD++  KCY RYS
Sbjct:   28 IYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFTTNGISGDSSSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRRCGPPVGYNSDEMTRRDSVVGSLAASSGGSYRVGVSGELQGVAQCTGDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYS 230          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR2_ARATH (Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.418e-46
Identity = 89/206 (43.20%), Postives = 123/206 (59.71%), Query Frame = 2
Query:  173 VFGGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVV--YGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGY-EPDAMGRRDAVLQGLMTASGPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYSYGKS 781
            ++  C+  K++PSS YE                + Y NFT+    P+  V  YG+YQCRGDL    C+TCV+ AV QVG LC     G LQ++ C ++YDN +FLGV+DKT++  KCG  + + + DA+ +   V+  L T  G YR GG  +V G+A C GDL+  +CQDCL  AIGRL++DCG A  G ++  KCY R+S G S
Sbjct:   32 IYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFNDQDALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFSVGGS 237          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR15_ARATH (Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.143e-36
Identity = 74/203 (36.45%), Postives = 118/203 (58.13%), Query Frame = 2
Query:  173 VFGGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTI----MGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKC-GPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRY 766
            ++GGC+ +KYTP++ +E             ++ +S+N+F +      SS    V+GLYQCR DL   DC+ C+  +V Q+  +C    G +LQL+GC+++Y+   FLG  D ++ +KKC   SV  + D   RRD VL  L +    Y+V  +  V G A CVGDL+  +C  CL +++G+L+N CG+A   +++  +CY RY
Sbjct:   30 IYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLYQCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKKCSSKSVENDYDFFKRRDDVLSDLESTQLGYKVSRSGLVEGYAQCVGDLSPSDCTACLAESVGKLKNLCGSAVAAEVYLAQCYARY 232          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR11_ARATH (Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.495e-22
Identity = 63/208 (30.29%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  173 VFGGCAQQKYT-PSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPS----VGYEPDAMGRRD---AVLQGLMTASGPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYSY 772
            ++ GCA+Q+ + PS  Y              +T + +   T  G++ Q  V GL+QCRGDLS  DC  CV+R     G LC +     +QL GCY+ Y+ + F  +    ++FK CG +     G+E     RRD    V+Q  +     +       V+ L  C GD+   +C  C+  A+ R + +CG++  G ++  KC++ YS+
Sbjct:   37 IYKGCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYK-TTTGTTSQTSVTGLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELLFKTCGKNNVAGTGFEQ----RRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSDCSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSF 239          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR3_ARATH (Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20
Identity = 61/208 (29.33%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  173 VFGGCAQQKYT-PSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPS----VGYEPDAMGRRD---AVLQGLMTASGPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYSY 772
            ++ GCA+Q+++ PS  Y              +T + +   T  G+S   +  GL+QCRGDLS  DC  CV+R       LC +     +QL GCY+ Y+ + F  +    ++FK CG +     G+E     RRD    V+Q  + +   +       V+ L  C GD+   +C  C+  A+ + + +CG++  G ++  KC++ YSY
Sbjct:   36 IYKGCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRFYK-TTTGTSTTTIT-GLFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLFKTCGKNNIAGTGFEE----RRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTDCSGCVKNALEKAQVECGSSISGQIYLHKCFIAYSY 237          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR56_ARATH (Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 59/218 (27.06%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  173 VFGGCAQQKYT-PSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCY--QDCGGAL----QLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVL----QGLMTAS-------GPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYSY 772
            +F GCA QK   P+  +              ++ SS+ + T  G+     V G++QCRGDL    C  CV++    V  LC   +D G  +     L GCY++Y+++ F       ++F+ CG     +P  +G+R+        G+ T S       G +  G    V+ L  C G L   +C +C+     + +++CG ++ G ++  KC++ YSY
Sbjct:   29 IFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVT-SGTDNTTAVIGVFQCRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSY 245          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR55_ARATH (Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.110e-12
Identity = 53/185 (28.65%), Postives = 81/185 (43.78%), Query Frame = 2
Query:  266 TYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDK---TVVF----------KKCGPSVGYEPDAMGRRDAVL---QGLMTASGPYRVGGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRYSY 772
            T SSYNN        ++ VYGL QCRGD+S  DC+TC+  A  ++  +C       +    C+++Y    F+G  D     + F          KK    +G   D + R +AVL   +GL    G  ++     ++GL  C  DL+  +C  C   A+G     C       +    CY+RY +
Sbjct:   64 TSSSYNN--------KEKVYGLAQCRGDISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLRYSQENFIGKLDTGAGLIYFNVANVTEIDPKKFDNELGALFDKI-RSEAVLPKNKGL--GKGKTKLTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEF 237          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR4_ARATH (Cysteine-rich repeat secretory protein 4 OS=Arabidopsis thaliana GN=CRRSP4 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.472e-12
Identity = 56/210 (26.67%), Postives = 88/210 (41.90%), Query Frame = 2
Query:  200 YTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLM------------TASGPYRV---------GGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRY 766
            +T +S YE             ++  SY+N T  G SP D V G++ CRGD+S   C+ CV  A  ++   C       +  + C V+Y +++F  + D+     +   S+ Y P+ + R    L   M             +S PY V          G+ D+  +A C  DL    C  CL  A+  +   C  + +  +F  KC LRY
Sbjct:   47 FTQTSTYETNRETVLSSLRLRSSLGSYSNATA-GISP-DTVRGMFLCRGDISETSCSDCVQTATLEISRNCTYQKEAFIFYEECMVRYSDSSFFSLVDERPYIIRY--SLSYAPN-LDRFPQTLSDKMDELIINATSSPSLSSTPYFVEDQERVKQFEGSFDIDSMAQCSPDLDPRNCTTCLKLAVQEMLECCNQSRWAQIFTPKCLLRY 251          
BLAST of EY711164 vs. ExPASy Swiss-Prot
Match: CRR9_ARATH (Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12
Identity = 54/204 (26.47%), Postives = 86/204 (42.16%), Query Frame = 2
Query:  200 YTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLG----VEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASG--PYRV---------GGARDVHGLAHCVGDLTAEECQDCLVQAIGRLENDCGTADYGDMF*GKCYLRY 766
            +T +S+YE             ++   Y+N T  G SP D V+G++ CRGD++   C  CV  A T++   C  +    +    C V+Y N +F      V   T+   +  P+       +  + + L   +++S   PY V          G+ D+  +  C  DL    C  CL  A  R+   CG   Y  +F  KC LR+
Sbjct:   42 FTQTSSYETNRDTLLASLRESSSLGHYSNAT-EGLSP-DTVHGMFLCRGDITTASCVDCVQTATTEIASNCTLNKRAVIYYDECMVRYSNVSFSSELEIVPSITIYSLRSAPNPTRFNQTLTEKFSELIFNVSSSSLVPYFVEDQERVTQSEGSYDLDTMVQCSPDLDIFNCTVCLRVAFFRISTCCGLPSYAKIFTPKCLLRF 243          
The following BLAST results are available for this feature:
BLAST of EY711164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CRR60_ARATH1.332e-7464.93Cysteine-rich repeat secretory protein 60 OS=Arabi... [more]
CRR12_ARATH3.184e-6056.65Cysteine-rich repeat secretory protein 12 OS=Arabi... [more]
CRR2_ARATH3.418e-4643.20Cysteine-rich repeat secretory protein 2 OS=Arabid... [more]
CRR15_ARATH7.143e-3636.45Cysteine-rich repeat secretory protein 15 OS=Arabi... [more]
CRR11_ARATH4.495e-2230.29Cysteine-rich repeat secretory protein 11 OS=Arabi... [more]
CRR3_ARATH2.466e-2029.33Cysteine-rich repeat secretory protein 3 OS=Arabid... [more]
CRR56_ARATH1.224e-1927.06Cysteine-rich repeat secretory protein 56 OS=Arabi... [more]
CRR55_ARATH1.110e-1228.65Cysteine-rich repeat secretory protein 55 OS=Arabi... [more]
CRR4_ARATH2.472e-1226.67Cysteine-rich repeat secretory protein 4 OS=Arabid... [more]
CRR9_ARATH3.229e-1226.47Cysteine-rich repeat secretory protein 9 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711164 ID=EY711164; Name=EY711164; organism=Citrus sinensis; type=EST; length=941bp
CGTCCTATACTGAGTCTTATTACCTCGACCCACGCGTCCGCATTTCTCAT
TCATGGCCGCAGCAAAAACAAAAACAACTTCAACAACTTCTCTTCTCTTA
CTCTTCTCATTCATAATTGTGTTCCTATCAATTCCTTCATTTTCTTCTTC
TTCTTCTTCAACAGATTCTTTTGTTTTCGGTGGCTGCGCCCAACAAAAAT
ACACACCAAGCTCAGCCTACGAGTCAAACCTCAACTCGCTCTTAACATCC
CTAGTCAACTCAGCCACGTACTCGTCCTACAACAACTTCACCATCATGGG
CTCAAGCCCGCAAGACGTCGTCTACGGGCTCTACCAATGCCGTGGTGACC
TGTCCATGCCCGACTGCGCCACGTGCGTGGCACGTGCCGTCACCCAGGTC
GGCGGCCTCTGCTACCAGGACTGCGGGGGGGCGCTTCAGCTCCAGGGCTG
TTACGTAAAATATGACAACGCAACGTTCCTGGGCGTCGAGGATAAGACCG
TGGTGTTTAAGAAATGTGGGCCGTCCGTTGGGTACGAGCCTGACGCTATG
GGCCGTAGAGATGCTGTGTTGCAAGGGCTCATGACCGCTAGCGGTCCCTA
CAGAGTTGGTGGGGCACGGGATGTTCATGGCCTGGCTCATTGCGTTGGGG
ATCTGACCGCGGAAGAGTGTCAGGATTGCTTGGTCCAGGCGATCGGGCGG
CTGGAAAATGATTGCGGAACTGCTGATTATGGCGATATGTTTTAAGGCAA
ATGTTACCTGAGGTACTCCTACGGTAAAAGCTCCAATATCTTACCAGGAT
CATACTGATTAATCTTACAATGAGCGGAGAGAAGACTTTGCCAATATTCG
TTGGATTATAACCGAGAGTATGCTTTAATCATAACCCTTCCTACTTTCAC
TTTAATATGGTTTGGGGAACAAGGGAACCTCTCCTTTTACT
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