EY711163

Overview
NameEY711163
Unique NameEY711163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711163 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.368e-25
Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 2
Query:  482 MGSSLLFPATSVTGVCWSRVQ----VKVPRFCVRASLDTNVSDMSVNAPKCLFPPEPEHYRGPKLKVAIIGAGLAGMSTAGGLLDQGP*GDIDEFRSFIGGK 775
            M SS     +S  GV   +V+    ++   F +R++LDT VSDMSVNAPK LFPPEPEHYRGPKLKVAIIGAGLAGMSTA  LLDQG   DI E R FIGGK
Sbjct:    1 MASSTCLIHSSSFGVGGKKVKMNTMIRSKLFSIRSALDTKVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGK 102          

HSP 2 Score: 22.3274 bits (46), Expect = 3.368e-25
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  775 VGSFIDKHGN 804
            VGSF+DK GN
Sbjct:  103 VGSFVDKRGN 112          
BLAST of EY711163 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.421e-25
Identity = 66/111 (59.46%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  488 SSLLFPATSVTGVCWS---------------RVQVKVPRFCVRASLDTNVSDMSVNAPKCLFPPEPEHYRGPKLKVAIIGAGLAGMSTAGGLLDQGP*GDIDEFRSFIGGK 775
            +SL FPATS  G   S                 ++KV +  VR+ LD +VSDM  NAPK LFPPEPEHYRGPKLKVAIIGAGLAGMSTA  LLDQG   DI E R+FIGGK
Sbjct:   10 TSLCFPATSAAGARTSFRTTDTFLRYRRSRQLTRLKVRKAVVRSDLDRDVSDMRTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGK 120          

HSP 2 Score: 22.3274 bits (46), Expect = 7.421e-25
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  775 VGSFIDKHGN 804
            VGSF+DK GN
Sbjct:  121 VGSFVDKQGN 130          
BLAST of EY711163 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.750e-23
Identity = 56/74 (75.68%), Postives = 61/74 (82.43%), Query Frame = 2
Query:  554 PRFCVRASLDTNVSDMSVNAPKCLFPPEPEHYRGPKLKVAIIGAGLAGMSTAGGLLDQGP*GDIDEFRSFIGGK 775
            P+  +RA L++ VSDMS NAPK LFPPEPEHYRGPKLKVAIIGAGLAGMSTA  LLDQG   DI E R+FIGGK
Sbjct:   44 PKSVIRADLNSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGK 117          

HSP 2 Score: 22.3274 bits (46), Expect = 1.750e-23
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  775 VGSFIDKHGN 804
            VGSF+DK GN
Sbjct:  118 VGSFVDKRGN 127          
BLAST of EY711163 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.751e-23
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 2
Query:  482 MGSSLLFPATSVTGVCWSRVQVKVPRFCVRASLDTNVSDMSVNAPKCLFPPEPEHYRGPKLKVAIIGAGLAGMSTAGGLLDQGP*GDIDEFRSFIGGK 775
            M SS++F AT    V      +K  RF V +SLD++VSDMSVNAPK LFPPEP  Y+GPKLKVAIIGAGLAGMSTA  LLDQG   DI + R+FIGGK
Sbjct:    1 MASSVVFAATGSLSV----PPLKSRRFYVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGK 94          

HSP 2 Score: 21.1718 bits (43), Expect = 1.751e-23
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  775 VGSFIDKHGN 804
            VGSF+D+ GN
Sbjct:   95 VGSFVDRRGN 104          
BLAST of EY711163 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.015e-23
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 2
Query:  566 VRASLDTNVSDMSVNAPKCLFPPEPEHYRGPKLKVAIIGAGLAGMSTAGGLLDQGP*GDIDEFRSFIGGK 775
            +RA LD+ VSDMS NAPK LFPPEPEHYRGPKLKVAIIGAGLAGMSTA  LLDQG   DI E R+FIGGK
Sbjct:   48 IRADLDSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGK 117          

HSP 2 Score: 21.1718 bits (43), Expect = 5.015e-23
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  775 VGSFIDKHGN 804
            VGSF+D+ GN
Sbjct:  118 VGSFVDRRGN 127          
BLAST of EY711163 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.205e-15
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 2
Query:  623 LFPPEPEHYRGPKLKVAIIGAGLAGMSTAGGLLDQGP*GDIDEFRSFIGGK 775
            LFPPEPEHYRGPKLKVAIIGAGLAGMSTA  LLDQG   D+ E R FIGGK
Sbjct:   52 LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDLYESRPFIGGK 102          

HSP 2 Score: 21.1718 bits (43), Expect = 2.205e-15
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  775 VGSFIDKHGN 804
            VGSF+D+ GN
Sbjct:  103 VGSFVDRQGN 112          
The following BLAST results are available for this feature:
BLAST of EY711163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ZDS_NARPS3.368e-2563.73Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_TARER7.421e-2559.46Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN1.750e-2375.68Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH1.751e-2364.29Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC5.015e-2380.00Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE2.205e-1582.35Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711163 ID=EY711163; Name=EY711163; organism=Citrus sinensis; type=EST; length=905bp
TTGCCGACCCACGCGTCCGGTCCAATGTTACTCCAGTACTCGACTTACTC
TATATTAACTTCTTTCGCTTAATCCATCTTTTTTTATTTTGCCAGTTAAT
TACCGGAAATTTCATTTCTTTACAAGTCCGTTATTATGCATGATTTACTT
TTAAATTAAAAGAAGAGAAATATTATAGCATATATAGTAGGGGATCTATC
AAGAATAACTTGAAAATCTGTGGTAAATACTTATGACTATTTACAAAGGA
AAATTTCAATTCTCTATTGTAGACTTGAACTCAGGTGTTTGGCCATCCAG
CCAATGCCTTGGGTGACACAAGAAAAGAGAGTTTAAAATTCATATTGCCG
CATGGTAAACCACTTTTTATTGTTTTCCCCACACATTTTCGTACTCATAT
TGAAGATTTTTATATGTGTATTTTAAGTGGATCCATCATATTTAGATGTG
GCACTTTGGATTTGGATTCTTTTATTTCAATATGGGTTCTTCACTTCTGT
TTCCTGCAACTTCAGTTACTGGTGTTTGTTGGTCTCGGGTTCAGGTGAAG
GTTCCAAGATTCTGTGTACGGGCTTCTTTGGACACTAACGTTTCTGATAT
GAGTGTTAATGCTCCCAAGTGTTTGTTTCCACCAGAACCGGAACATTATA
GAGGACCAAAGCTGAAAGTGGCTATTATTGGAGCTGGGCTTGCAGGCATG
TCAACAGCAGGGGGATTGTTAGATCAAGGCCCATGAGGTGATATAGATGA
ATTCAGGTCTTTCATTGGTGGTAAGTGGGTTCATTTATCGATAAACATGG
AAACCTACTGAATACCGCCTGCACTTTTTCTTTGGATGGACCATAATATG
GTCCCATTGATGAAATAGTTTTTCTGGGATGGCTACGGGCCATGGCCACA
AAAAT
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