EY711162

Overview
NameEY711162
Unique NameEY711162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10774 contig Csv1_Contig10774:393..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.914e-78
Identity = 155/274 (56.57%), Postives = 194/274 (70.80%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEEDYRGALHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPXQDLATVDSILLGELPSXDDHDAR 901
            D+RA F+Q+ Y D+ Y +E++ IEE F+PLVEKCK+  RA+RIGTNHGSLSDRIM+ YGD+P GMVESA EFARICRK D+HNFLFSMKASNP VM+QAYRLL   MY   WDYPLHLGVTEAGEGEDGR+KSA+GIG+LL DG+GDTIRVSLTE P  EI+PC+RL  L   +A  Q+GVAPF E +R     +RR   L              +HRDG+V +S+ ++ LK    LY+ +  +   G P    AT D+++L + P+ D  + R
Sbjct:  124 DKRASFKQIVYDDESYAREIERIEEKFTPLVEKCKRLNRAMRIGTNHGSLSDRIMNRYGDTPFGMVESALEFARICRKNDYHNFLFSMKASNPQVMIQAYRLLTQAMYALEWDYPLHLGVTEAGEGEDGRIKSAMGIGSLLIDGIGDTIRVSLTEDPWHEINPCQRLIKLA--SAYQQQGVAPFIENYRQIEAIERRQVHL---------SSTVPMHRDGTVFISLPINMLKEAS-LYQQIGCEGPFGKPKLKTATADNLVL-KNPNSDSEEKR 384          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.073e-55
Identity = 123/253 (48.62%), Postives = 165/253 (65.22%), Query Frame = 2
Query:   86 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHY--FDFQRRSGQLPIQ---KEGEEEDYRGAL------------HRDGSVLMSVSLDQLKAPEL 787
            + +FE  EY+D EY++EL  ++E F+PLV  C+++GRA+RIG+NHGSLSDRI++ +GD+P GMVESA EFA+I R LD+H+ +FSMKASN  VMV AYRLLV  M   G  W+YP+HLGVTEAG GEDGR+KSA+GIG+LL DG+GDT+RVSLTE   +E+    RL+N   + +E       F E    Y    F +R G L +    + G E+  R A+               G ++  +SL QL A E+
Sbjct:  124 KKKFEVREYSDAEYREELDRLKEEFTPLVLFCREHGRAMRIGSNHGSLSDRILNRFGDTPEGMVESAIEFAQIARDLDYHSLVFSMKASNVKVMVAAYRLLVERMNALGPDWNYPIHLGVTEAGGGEDGRIKSAVGIGSLLTDGIGDTLRVSLTEDAVREVPVAYRLSN-PFQPSERSDDPVSFPEPELSYDPLKFSKRQGGLAMYYGVRLGWEQPVRVAVPDAGFYALQTEREAMGDMMPELSLGQLDAIEV 375          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.288e-54
Identity = 112/197 (56.85%), Postives = 144/197 (73.10%), Query Frame = 2
Query:   77 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQR 667
            AD++ +F   +YTD EY +EL+ I  +FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L++++ + SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P  EI   R LA    +     + V  + E  R+ F ++R
Sbjct:  122 ADKK-KFAVRDYTDSEYDEELERISAIFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSE-FRNPFTYER 316          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.608e-54
Identity = 112/197 (56.85%), Postives = 142/197 (72.08%), Query Frame = 2
Query:   77 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQR 667
            AD++ +F   +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L +++ + SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P  E+   + LA+   +       V  + E  R+ F + R
Sbjct:  122 ADKK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSVKGYSE-FRNPFSYNR 316          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.325e-54
Identity = 112/197 (56.85%), Postives = 143/197 (72.59%), Query Frame = 2
Query:   77 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQR 667
            AD++ +F   +YTD EY +EL+ I   FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L++++ + SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P  EI   R LA    +     + V  + E  R+ F ++R
Sbjct:  122 ADKK-KFAVRDYTDSEYDEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSE-FRNPFTYER 316          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.632e-53
Identity = 111/197 (56.35%), Postives = 142/197 (72.08%), Query Frame = 2
Query:   77 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQR 667
            AD++ +F   +YTD +Y +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L +++ + SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P  E+   + LA+   +       V  + E  R+ F + R
Sbjct:  122 ADKK-KFAVRDYTDLKYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSVKGYSE-FRNPFSYNR 316          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.058e-52
Identity = 122/258 (47.29%), Postives = 153/258 (59.30%), Query Frame = 2
Query:   47 SADACGGRVG---------ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEEDYRGALHRDGSVLMSVSLDQLKAPELLY 793
            +ADA  G V           D+   F  LEYTD+EY  E++ I E F P +  CK +G A+RIG NHGSLSDRIMS YGD+P GMV S  EF RICR+ +F + + S+KASN VVMV+  RLLV  M      YPLHLGVTEAG+GEDGR+KSA+GIGTLL DG+GDTIRVSL+E PE E+   R+L +  +R  E  +   P E      FD    S ++    EG    +   +  D S       D L  P+ +Y
Sbjct:   97 AADAAAGEVEKVRINPGNYVDKVKTFSHLEYTDEEYAAEIEKIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCMEFLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRIKSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVDY-IRERENHR---PIEASMAPGFDTVATSRRISRVVEGIGGTFSPVVISDRS-SGDFEFDYLSLPDYIY 349          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.249e-52
Identity = 104/204 (50.98%), Postives = 131/204 (64.22%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPIQ 691
            D+R  F    Y+D++Y + L+ + E FSPLV KCK+ GRA+RIG NHGSLS+RIM  YGD+  GMV SA E+A +C  +D+HN +FSMK+SNP  MV AYR L  E+    W YPLHLGVTEAG G DG +KS++GIGTLL +GLGDTIR SLT  P  EI  C  L     + ++  K   PFE  H      Q      P++
Sbjct:  120 DKRNMFSGKIYSDEQYTRSLERLFEKFSPLVAKCKRLGRAMRIGVNHGSLSERIMQRYGDTIEGMVFSALEYAEVCVNMDYHNIVFSMKSSNPRTMVAAYRALARELDQRKWLYPLHLGVTEAGSGMDGMIKSSVGIGTLLSEGLGDTIRCSLTGSPTLEIPVCLDLLKETAKYSKSTKKYNPFEIYHSKQLTTQTTPKHFPVE 323          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACV8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispG PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.995e-51
Identity = 101/164 (61.59%), Postives = 124/164 (75.61%), Query Frame = 2
Query:   95 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 586
            F++LEYTD+EY +E++ I   F P +  CK+   A+RIG NHGSLSDRIMS+YGD+P GMVES  EF RIC    F++ + S+KASN VVMV+  RLLV EM   G  +PLHLGVTEAG+GEDGR+KSA+GIG LL DGLGDTIRVSL+E PE EI   R+L +
Sbjct:  122 FQKLEYTDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCMEFLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRIKSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACFR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis GN=ispG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.605e-51
Identity = 104/164 (63.41%), Postives = 122/164 (74.39%), Query Frame = 2
Query:   95 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 586
            F+QLEYTD+EY  ELQ I + F P +  CK+   AVRIG NHGSLSDRIMS YGD+P GMVES  EF RIC    F + + S+KASN VVMV+  RLLV+ M   G  +PLHLGVTEAG+GEDGR+KSA+GIG LL DGLGDTIRVSL+E PE EI   R+L +
Sbjct:  122 FKQLEYTDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRIKSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285          
The following BLAST results are available for this feature:
BLAST of EY711162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
ISPG_PARUW1.914e-7856.574-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_AKKM85.073e-5548.624-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBL3.288e-5456.854-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIN5.608e-5456.854-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBJ7.325e-5456.854-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIC1.632e-5356.354-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PARD81.058e-5247.294-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLMU5.249e-5250.984-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACV81.995e-5161.594-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACFR2.605e-5163.414-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711162 ID=EY711162; Name=EY711162; organism=Citrus sinensis; type=EST; length=921bp
CACTAGTCCCCTCTTTCCTATTCCGGACTTATTTCTCGACCCCGCGTCCG
CGGACGCGTGTGGCGGACGCGTGGGTGCTGATAGACGGGCTCAGTTTGAG
CAGCTAGAGTACACAGACGATGAGTATCAGAAAGAACTTCAGCATATTGA
GGAGGTTTTTAGTCCATTGGTTGAGAAATGTAAAAAGTACGGAAGGGCAG
TGCGTATTGGGACTAACCATGGGAGCCTTTCAGATCGTATCATGAGCTAC
TATGGGGATTCTCCTAGGGGAATGGTTGAATCTGCCTTTGAGTTTGCAAG
AATCTGCCGGAAATTGGACTTCCATAATTTTCTCTTTTCAATGAAAGCAA
GCAACCCAGTCGTAATGGTCCAAGCATACCGTCTGCTTGTAGCTGAAATG
TACGTTCATGGCTGGGATTACCCATTACATTTGGGAGTGACTGAAGCTGG
AGAAGGTGAAGATGGTCGGATGAAATCTGCTATTGGAATTGGTACCCTTC
TTCAGGATGGTTTGGGTGATACAATCAGGGTTTCGCTTACAGAACCACCA
GAAAAGGAGATTGACCCTTGCAGAAGGTTGGCCAACCTGGGTATGAGAGC
AGCTGAGCTTCAGAAAGGAGTGGCACCATTTGAGGAAAAGCACAGACATT
ATTTTGATTTTCAGCGTCGTTCTGGTCAACTGCCAATTCAAAAGGAGGGT
GAGGAGGAGGATTACAGAGGTGCTCTGCACCGTGATGGCTCAGTTCTCAT
GTCCGTTTCTCTGGATCAGTTGAAGGCTCCGGAATTACTGTACAAGTCAC
TTGCAGCAAAGCTAGTCGTTGGCATGCCGTTNCAGGATCTAGCAACAGTC
GATTCAATCTTGTTAGGAGAGCTTCCNTCAGNTGATGATCATGATGCTCG
TCTAGCTCTGAAACGGGTTGT
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