EY711158

Overview
NameEY711158
Unique NameEY711158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig525 contig Csv1_Contig525:26..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711158 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.136e-91
Identity = 163/230 (70.87%), Postives = 188/230 (81.74%), Query Frame = 3
Query:   27 LSAPNSNRNPIQSHLSFAFTHHYPMGFPANGSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELL 716
            LS  +S +  + S+    FT    +  P NG       LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KPTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+  L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+IPNSMT+LDELL
Sbjct:  349 LSDGSSEKKDVSSNTVQTFT----VVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELL 574          

HSP 2 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2
Query:  617 IRFIQSSQLHHKDHSI*KGSQHSKLNDY------LG*ASSISIEMAKRNLTGIWNFTNPGVVKHNEILGDYXQYIDPN-SLGKXXPXESXQX*LLPKEHNELD 904
            +R   SS L++  + I K S+++K+ D       L     ISIEMAKRNL GIWNFTNPGVV HNEIL  Y  YI+P          E  +  +  + +NE+D
Sbjct:  536 VRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMD 638          
BLAST of EY711158 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 9.619e-91
Identity = 156/200 (78.00%), Postives = 176/200 (88.00%), Query Frame = 3
Query:  117 GSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELL 716
            G     + LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KP+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+  L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNFITKI+RY KVVNIPNSMTILDELL
Sbjct:  372 GCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELL 571          

HSP 2 Score: 70.0922 bits (170), Expect = 1.994e-11
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  617 IRFIQSSQLHHKDHSI*KGSQHSKLNDY------LG*ASSISIEMAKRNLTGIWNFTNPGVVKHNEILGDYXQYIDPN-SLGKXXPXESXQX*LLPKEHNELD 904
            +R   SS L++  + I K S+++K+ +       L     ISIEMAKRNL GIWNFTNPGVV HNEIL  Y  YI+P+         E  +  + P+ +NE+D
Sbjct:  533 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMD 635          
BLAST of EY711158 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.641e-90
Identity = 162/212 (76.42%), Postives = 181/212 (85.38%), Query Frame = 3
Query:   84 THHYPMGFPANGSDAGSKP-LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELL 716
            TH       +NG+    KP LKFLIYG+TGWIGGLLGK+C  Q I + YG GRLE+R+SL  DI +VKPTHVFN+AGVTGRPNVDWCESHK ETIR NV GTLTLADVCR+ GL+++N+ATGCIFEYD  HP GSGIGFKEEDTPNF GSFYSKTKAMVEELLK ++NVCTLRVRMPISSDL+NPRNFITKI+RY KVVNIPNSMT+LDELL
Sbjct:  367 THMVVPSQRSNGTP--QKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELL 576          

HSP 2 Score: 70.8626 bits (172), Expect = 1.169e-11
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  617 IRFIQSSQLHHKDHSI*KGSQHSKLNDY------LG*ASSISIEMAKRNLTGIWNFTNPGVVKHNEILGDYXQYIDPN-SLGKXXPXESXQX*LLPKEHNELDA 907
            +R   SS L++  + I K S+++K+ +       L     ISIEMAKRNL GIWNFTNPGVV HNEIL  Y  YI+P          E  +  + P+ +NE+DA
Sbjct:  538 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDA 641          
BLAST of EY711158 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.482e-39
Identity = 76/198 (38.38%), Postives = 114/198 (57.58%), Query Frame = 3
Query:  141 LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVT---GRPNVDWCE--SHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFEN-VCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELL 716
            +K+LI+G  GWIG ++ K+ + Q         R ++ +++E +I+ +KP  V +  G T   G   +D+ E     VE ++ N+ G L LA +C+   + L    TGCIFE  +        GF E D PNF GS YS  K   + L+  F+N V  LR+RMPI+ +  NPR+FITKI  Y ++ +IPNSMTILD+++
Sbjct:    1 MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTHGPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADEK-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILSYSRICSIPNSMTILDQMI 196          

HSP 2 Score: 42.743 bits (99), Expect = 6.482e-39
Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 2
Query:  719 ISIEMAKRNLTGIWNFTNPGVVKHNEILGDYXQYIDPN 832
            + I+MA+   TG +NFTNPG+V HNEIL        PN
Sbjct:  198 VMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPN 235          

HSP 3 Score: 23.8682 bits (50), Expect = 6.482e-39
Identity = 7/22 (31.82%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  817 VHRPQLTWKNXTXGEXAXVIVA 882
            +H+P LTW+N +  +   ++ A
Sbjct:  231 IHKPNLTWENMSREQQLAILKA 252          
The following BLAST results are available for this feature:
BLAST of EY711158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
RHM2_ARATH1.136e-9170.87Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
RHM3_ARATH9.619e-9178.00Probable rhamnose biosynthetic enzyme 3 OS=Arabido... [more]
RHM1_ARATH1.641e-9076.42Probable rhamnose biosynthetic enzyme 1 OS=Arabido... [more]
YL780_MIMIV6.482e-3938.38Uncharacterized protein L780 OS=Acanthamoeba polyp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711158 ID=EY711158; Name=EY711158; organism=Citrus sinensis; type=EST; length=907bp
TTCTCGACCCACGCGTCCGCGAAATTCTATCAGCTCCAAATTCAAATCGA
AATCCGATCCAGTCTCATCTCTCCTTTGCATTCACTCACCATTACCCAAT
GGGTTTCCCAGCCAACGGCTCCGACGCCGGCTCCAAGCCGCTCAAGTTTC
TCATCTACGGCCGCACTGGCTGGATCGGGGGCTTGCTCGGCAAGCTCTGC
CAAGCTCAGTCCATTGACTTCACCTACGGCTCCGGCCGCCTCGAGAACCG
CGCCTCCCTCGAAGCCGACATCGCCGCCGTCAAGCCCACCCACGTCTTCA
ACGCGGCCGGGGTGACCGGTAGGCCCAACGTCGACTGGTGCGAATCGCAT
AAGGTCGAGACCATACGGACTAATGTCGTCGGCACCCTTACGCTTGCTGA
CGTCTGCAGAGACAAAGGTTTGATTCTCATTAATTACGCCACCGGCTGCA
TCTTCGAGTACGATTCCGGTCACCCCCTCGGATCCGGCATCGGCTTCAAG
GAGGAGGATACTCCGAATTTTGTCGGATCTTTCTACTCCAAGACTAAGGC
CATGGTGGAAGAGTTGCTCAAGAATTTTGAGAATGTCTGTACTTTGCGTG
TCAGGATGCCGATCTCATCAGATTTATCCAATCCTCGCAACTTCATCACA
AAGATCACTCGATATGAAAAGGTAGTCAACATTCCAAACTCAATGACTAT
CTTGGATGAGCTTCTTCAATTTCCATTGAGATGGCAAAGAGAAACCTCAC
TGGAATTTGGAACTTTACGAACCCCGGTGTGGTGAAGCACAATGAGATTC
TGGGAGATTATCNGCAGTACATAGACCCCAACTCACTTGGAAAAATNNTA
CCTNNGGAGAGCANGCAAANGTGATTGTTGCCCAAGGAGCACAACGAGCT
TGATGCA
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