EY711144

Overview
NameEY711144
Unique NameEY711144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10980 contig Csv1_Contig10980:219..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.137e-40
Identity = 96/182 (52.75%), Postives = 117/182 (64.29%), Query Frame = 1
Query:   61 ATSASRFFNTNAVRQYDFGPDDRDLDIXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXX--SVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            A+SASR FNTNA+RQYD   DDR++D+                          RSLSQVLN +D +T++P  S      RRGWDA+ T+DAL L +DMPGLGK  V++S+EQNTL I+             S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVPK+KEEER +V  VKVD
Sbjct:   25 ASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.351e-40
Identity = 94/197 (47.72%), Postives = 119/197 (60.41%), Query Frame = 1
Query:   28 ADPRVRTVALPATSASRFFNTNAVRQYDFGPDDRDLDIXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            A PR      P  ++SR FNTNA R Y+ G     +D                          TRSLSQ+LNFMDQ++E P  S TRG    G+RRGW+ K  DDAL+L IDMPGL +  V+++LEQNTLVIR           S   RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +PK+KE+ER ++  + VD
Sbjct:   19 AVPRALRAVRPVAASSRLFNTNAARNYEDG-----VDRNHHSNRHVSRHGGDFFSHILDPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD 210          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.721e-38
Identity = 97/200 (48.50%), Postives = 118/200 (59.00%), Query Frame = 1
Query:   25 SADPRVRTVALPATSASRFFNTNAVRQYDFGPDDRDLDIXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXXSV----RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            S  PR R+V  PA S SR FNTNAVR YD   D  + D                          TRS+SQVLN MDQ  E+P  S TRG    G RRGWD K  DDAL L IDMPGL +  V+++LEQ+TLVIR                 RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +PK+KE+ER DV Q++++
Sbjct:   14 SIAPRSRSVLRPAVS-SRLFNTNAVRSYD--DDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEIN 210          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.572e-34
Identity = 84/184 (45.65%), Postives = 106/184 (57.61%), Query Frame = 1
Query:   67 SASRFFNTNAVR---QYDFGPDDRDLDIXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGG---LRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            S SR FNTNA      +D   DDR                             TRS+ Q++N MDQ+ E+PF + +RG    +RRGWD +  ++AL L +DMPGL K  V+VS+E NTL+I+             RRY+SRI+L   LY+ D IKAEMKNGVLKVTVPK+KEEE+ DVFQV VD
Sbjct:   24 SVSRSFNTNAQMGRVDHDHELDDRS---NRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVMVD 204          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32
Identity = 88/198 (44.44%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   43 RTVALPATSAS-RFFNTNAVRQYDFGPDDRDLDIXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGGLR-----------RGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            R++  PA SAS R F+TNA+RQYD   DD   DI                           S+     F           G    LR           RGWDA+ T+DAL+L +DMPGL K  V++S+EQNTL+I+           S RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VPK+KEEER DV  VKV+
Sbjct:   18 RSLLRPAASASHRSFDTNAMRQYDNRADDHSTDIDRHSERSFPSTARRDDIFLRCVG----SIFSDSEFEPGSEHDGPGHGQSVPLRVARDRSWRWSGRGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.014e-28
Identity = 67/129 (51.94%), Postives = 88/129 (68.22%), Query Frame = 1
Query:  220 RSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            +SL ++L+ MD +  +P        LRRGW+AK +++AL+L +DMPGLGK HV+V  EQN+LVI+                RY+ RI+L  ++YR DQIKAEMKNGVLKV VPKVKEE+R DVFQV V+
Sbjct:   93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVFQVNVE 220          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24
Identity = 83/217 (38.25%), Postives = 104/217 (47.93%), Query Frame = 1
Query:    1 PFGTCPEFSADPRVRTVALPATSAS--RFFNTNA--VRQYDF----GPDDRDLDIXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFM-DQMTESPFFSGTRG----GLRRG--WDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 600
            P    P  S  P     A  AT+A+  R +NT    +R+YD     G D  D                              SL ++L  M D    +    GT G      RRG  W AK  DDA++L + MPGLGK HV+V  EQN+LVI+                RYT RI+LP   ++ D+IKAEMKNGVL+V VPK+KEEER DVFQV V+
Sbjct:   32 PVAAAPAASGKPVTAPAAATATNAASRRLYNTEGAPLRRYDVVDESGTDSGDEYDATDDGRRLTVPFFFSASDVLDPFGAPTSLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVFQVNVE 248          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  220 RSLSQVLNFMDQMTES--PFFSGTRGG-----LRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 594
            R++ Q+L+ MD+M E   P     RGG     +R  WD K  +  + +  DMPGL K  V++S+E N LVI    +           SV  Y +R+ LP+   + D+IKAE+KNGVL +T+PK K E +    Q++
Sbjct:   93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 44/135 (32.59%), Postives = 77/135 (57.04%), Query Frame = 1
Query:  220 RSLSQVLNFMDQMTESPF-FSGTR----GGLRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVI-----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 594
            R++ Q+++ MD++ E    F G+R    G +R  WD K  ++ + +  DMPGL K  V+VS+E + LVI     +           +   Y +R+ LP+ + + D++KAE+KNGVL +++PK K E++    ++K
Sbjct:  108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241          
BLAST of EY711144 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  220 RSLSQVLNFMDQMTESPF-FSGTR---GGLRRGWDAKYTDDALNLSIDMPGLGKAHVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 594
            RS+ Q+L+ MD++ E    F G     G +R  WD K  +  + +  DMPGL K  V+VS+E + LVI    +           S R Y+S   R+ LP+   + D++KAE+KNGVL +T+PK K E +    QV+
Sbjct:   47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181          
The following BLAST results are available for this feature:
BLAST of EY711144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HS22M_PEA3.137e-4052.75Heat shock 22 kDa protein, mitochondrial OS=Pisum ... [more]
HS235_ARATH5.351e-4047.7223.5 kDa heat shock protein, mitochondrial OS=Arab... [more]
HS23M_ARATH1.721e-3848.5023.6 kDa heat shock protein, mitochondrial OS=Arab... [more]
HS23C_CHERU2.572e-3445.65Small heat shock protein, chloroplastic OS=Chenopo... [more]
HS22M_SOYBN2.407e-3244.44Heat shock 22 kDa protein, mitochondrial OS=Glycin... [more]
HS24M_ORYSJ8.014e-2851.9424.1 kDa heat shock protein, mitochondrial OS=Oryz... [more]
HS26M_ORYSJ4.116e-2438.2526.2 kDa heat shock protein, mitochondrial OS=Oryz... [more]
HS25P_ARATH7.780e-1536.7625.3 kDa heat shock protein, chloroplastic OS=Arab... [more]
HS22C_PETHY1.467e-1332.59Small heat shock protein, chloroplastic OS=Petunia... [more]
HS22C_SOYBN5.576e-1336.76Small heat shock protein, chloroplastic (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711144 ID=EY711144; Name=EY711144; organism=Citrus sinensis; type=EST; length=723bp
CCCTTCGGCACTTGTCCGGAATTCTCTGCCGACCCACGCGTCCGCACCGT
CGCTCTTCCTGCTACTTCGGCATCTCGGTTCTTCAACACAAACGCTGTTC
GTCAATACGATTTCGGCCCAGACGACCGTGATCTCGACATTGATCGCCGT
TCCGCTCGCTCTTTCCCTCGCCGTCGTGACGACTTCTTCTCAGATGTGTT
TGATCCATTTTCACCAACAAGGAGCCTGAGCCAGGTCCTGAACTTCATGG
ATCAGATGACGGAGAGCCCTTTCTTCAGTGGCACGCGTGGTGGACTGCGC
CGAGGCTGGGATGCTAAATATACCGATGACGCATTGAACCTCAGCATCGA
CATGCCAGGGCTGGGCAAGGCACACGTGAGAGTCTCTCTGGAGCAGAACA
CTCTGGTGATCAGAGGCGAGGGCGGAAAAGAAGGAGAGGGCGAAGAGAGC
GTGCGTAGGTACACCAGCAGGATTGATTTGCCAGAGAAGCTCTACAGGAC
TGATCAGATCAAGGCAGAGATGAAGAATGGTGTGCTGAAGGTGACGGTGC
CCAAGGTGAAGGAAGAGGAGAGGGCTGATGTGTTCCAAGTGAAGGTTGAT
TAAAGAGTTGGCTTTTAGTAGTAGCTTTTTCTGGCCAGGATATTGAGTGA
GAATAATTTTGGGTAAGTTATGTGAGCTACCAGCTACAAACATGTTCTGA
AAACAAAAAAAAAAAGGGGGGCC
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