EY711140

Overview
NameEY711140
Unique NameEY711140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711140 vs. ExPASy Swiss-Prot
Match: WSD1_ARATH (O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.762e-41
Identity = 98/213 (46.01%), Postives = 131/213 (61.50%), Query Frame = 1 
Query:  106 VHRTIGLDDIKLVKNAMNMTINDVILGLTQAALSRYLHRRYGDKSMQNGGAKHESNNTLPKKLRLRAAILVNLRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKHSLEAFCTFSTAKFVLYTFGAKVAAAIAHRVLSNTTMAFSNGVGPLEK*ASTASNGLSCSRGYG--HPHALTIHF-----QIIVN 723
            VHR I  +D+KL+K+ MNM +NDV+LG+TQA LSRYL  +Y        G+  E    L +KLR+R A+ +NLRP T I+ LADMMAK SK  WGN+IG ++ P  +  + DPL+YIR AKAT+DR+K SLEAF  +   KF L  FG K   A   R+  +T++AFSN  GP E+  S   + +S   G       AL IHF     +I++N
Sbjct:  239 VHRIISFEDVKLIKDTMNMKVNDVLLGMTQAGLSRYLSSKYD-------GSTAEKKKIL-EKLRVRGAVAINLRPATKIEDLADMMAKGSKCRWGNFIGTVIFPLWVKSEKDPLEYIRRAKATMDRKKISLEAFFFYGIIKFTLKFFGGKAVEAFGKRIFGHTSLAFSNVKGPDEE-ISFFHHPISYIAGSALVGAQALNIHFISYVDKIVIN 442
The following BLAST results are available for this feature:
BLAST of EY711140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WSD1_ARATH5.762e-4146.01O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711140 ID=EY711140; Name=EY711140; organism=Citrus sinensis; type=EST; length=951bp
CGGAACTACTAGCTGACCCACGCGTCCGCCCACGCGTCTTCCCACAAATG
GGCGGACGCGTGGGCGGACGCGTGGGCGGGAGTTGAGCTTGTGTTTTACC
CCTTTGTGCACAGGACAATTGGTTTGGATGACATAAAGCTTGTGAAGAAT
GCAATGAACATGACAATCAACGATGTTATTCTGGGACTAACACAAGCTGC
TCTCTCGCGGTATCTTCATCGAAGATATGGTGATAAGTCTATGCAAAACG
GAGGAGCAAAGCATGAGTCAAATAATACTCTACCAAAGAAATTGCGCCTA
CGGGCAGCCATTCTCGTCAACCTTAGACCAACTACAGGGATCCAGGCTTT
AGCTGATATGATGGCCAAAGAATCAAAGGGCGGATGGGGCAATTGGATCG
GATACATTCTCCTCCCCTTCACCATTGCTTTACAAAATGACCCATTAGAT
TATATTCGTGTAGCTAAAGCCACCATCGATCGTAGAAAGCATTCCCTTGA
AGCCTTCTGCACATTTTCAACTGCCAAGTTTGTGCTCTACACATTTGGAG
CTAAGGTCGCTGCTGCTATAGCGCACAGAGTTCTTTCAAATACAACAATG
GCCTTCTCAAATGGGGTCGGTCCTCTAGAGAAATAAGCTTCTACGGCATC
CAATGGCTTATCTTGCTCCAGGGGTTATGGCCATCCGCATGCATTGACGA
TCCATTTCCAAATTATTGTGAACAGATGACCTTTTGTGTCGCTGGTGACC
CAAACGTGATTCCTGATCCTCCCCTGCTCCTGAAAGAATTTGAAGAAACT
CCTTAAAGTCTCAAGGGATGGGTTGTTTAAAAAGGATTAACCAAAGATGA
TGCTGCCCGGGTGAACCAGCCATAAAATTGATTCTTTTATTTAAGGGAAT
AACATTTATTTTTTCCAGAATTTGTAAATATGAAGATTTTTTCTGGGAAT
T
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