EY711139

Overview
NameEY711139
Unique NameEY711139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7319 contig Csv1_Contig7319:72..1021. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY711139 vs. ExPASy Swiss-Prot
Match: GAT10_ARATH (GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.731e-25
Identity = 91/285 (31.93%), Postives = 137/285 (48.07%), Query Frame = 3 
Query:  123 MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLP-GSDSVF-SNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQES-STITKDDSSHNQFQTXXXXXXXXXXXXXXGEKTVLGSPETTXXXXXXXXXXXXXXXXMFNPRPPVQ-------LVSPTSSVTETQPQHRLIAPQASSDSENFAESRLVIKYQSNSPRSTEXKGNQIVSSKSFR*D**SGAHTAGRKCMHCEITRR---LIGEQGHWAKNPLHACRVPY 938
            MIGT+F +++DCG+FFD++DDL+DFP  D++ G    DS+SFP+IW T  D+ P  SD +F SN+++D S +L VP+EDIV++E   +FVE+     +L   K++S ST T   SSH+QF++                ++   S +TT                   PRPPVQ        V    S    +   + ++      ++   +   +    S+S    E  GN + S         S      RKCMHCE+T+     +G  G   K   +AC V Y
Sbjct:    1 MIGTSFPEDLDCGNFFDNMDDLMDFPGGDIDVGFGIGDSDSFPTIWTTHHDTWPAASDPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEE-----TLVEKKEDSFSTNTDSSSSHSQFRSSSPVSVL---------ESSSSSSQTTNTTSLVLPGKHGRPRTK-RPRPPVQDKDRVKDNVCGGDSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSGIDLEVNGNNVDSY--------SSEQYPLRKCMHCEVTKTPQWRLGPMG--PKTLCNACGVRY 260
The following BLAST results are available for this feature:
BLAST of EY711139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GAT10_ARATH5.731e-2531.93GATA transcription factor 10 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711139 ID=EY711139; Name=EY711139; organism=Citrus sinensis; type=EST; length=948bp
CACTGGTCACCTTCGGCACCTGTCCGGAATTCCCTTCCCGACCCACGCGT
CCGAAATTCAGCTCTCGCTCTCTTTCTCTGCCGCCAACTCCACGAGGAAA
ATTTTAATTATCAAACTCAAACATGATTGGAACAAACTTCATGGACGAAA
TAGACTGCGGCAGCTTCTTTGATCACATAGACGATTTACTCGACTTCCCA
AATGAAGATGTCGAAGCCGGGTTACCCAACGCCGATTCTAACTCGTTCCC
CTCCATTTGGCCGACTCAGTCCGACTCCTTACCCGGGTCCGACTCAGTTT
TCTCCAACAGCTCCACTGACCTGTCCACCCAGCTCTCTGTTCCATATGAG
GACATTGTTCAGCTTGAGTGGCTTTCGAACTTTGTTGAGGATTCCTTCTC
TGGAGGAAGCCTTACTATGAGCAAACAAGAGTCATCCACGATCACTAAGG
ATGATTCATCTCACAACCAGTTTCAGACCTCCAGCCCGGTCTCTGTTTTA
GAGAGCAGCAGCTCCTGCTCGGGGGAGAAAACCGTGTTGGGAAGCCCTGA
GACTACGGCCCCTGGGAGGCGCGGGCGTGCTCGTAGCAAGCGCCCTCGCC
CCGCAATGTTTAATCCCCGTCCTCCGGTTCAACTTGTGTCGCCAACTTCC
TCAGTCACTGAAACACAACCACAGCATCGCTTAATTGCCCCCCAGGCCTC
ATCTGATTCTGAGAATTTTGCAGAGTCTCGCCTTGTGATTAAATACCAAA
GCAATTCACCCCGGAGCACAGAANGAAAAGGAAATCAAATTGTCAGTTCC
AAAAGTTTCCGATGAGACTAGTGAAGTGGGGCCCACACAGCGGGTAGGAA
ATGCATGCATTGCGAGATAACGAGACGCCTCATTGGAGAGCAGGGGCATT
GGGCCAAAAACCCTTTGCATGCATGCCGGGTTCCCTATAATCTCGCAA
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