EY711128

Overview
NameEY711128
Unique NameEY711128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: ADAT2_BOVIN (tRNA-specific adenosine deaminase 2 OS=Bos taurus GN=DEADC1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.685e-21
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  224 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSD 604
            +T  +M+ A+Q AK ALD+ EVPVGC+++ + +V+                  M AID  LD  ++ G S SE+   F    LYVT EPCIMCAAAL ++ I  + YGC NE+FGGCGS+L +  +D
Sbjct:   21 ETEKWMEQAMQMAKDALDNTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCRRRGRSPSEV---FEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASAD 144          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: ADAT2_HUMAN (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.829e-20
Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 2
Query:  224 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSD 604
            +T  +M+ A+  AK AL++ EVPVGC+++ + +V+                  M AID +LD  +++G S SE+   F    LYVT EPCIMCAAAL ++ I  + YGC NE+FGGCGS+L++  +D
Sbjct:   21 ETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: ADAT2_MOUSE (tRNA-specific adenosine deaminase 2 OS=Mus musculus GN=Adat2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20
Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 2
Query:  224 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSD 604
            +T  +M+ A++ AK AL+++EVPVGC+++ + +V+                  M AID +LD   ++G S S +   F    LYVT EPCIMCAAAL ++ I  + YGC NE+FGGCGS+L++  +D
Sbjct:   21 ETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCHQHGQSPSTV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: ADAT2_XENTR (tRNA-specific adenosine deaminase 2 OS=Xenopus tropicalis GN=adat2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.712e-18
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 2
Query:  236 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSL 592
            +M  A Q A+ AL++ EVPVGC+++ D +V+                  M AID +LD  +KN     ++   F    LYVT EPCIMCA AL +L I  + YGC NE+FGGCGS+L++
Sbjct:    8 WMHKAFQMAQDALNNGEVPVGCLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWCEKNSKKSRDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNV 123          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: ADAT2_XENLA (tRNA-specific adenosine deaminase 2 OS=Xenopus laevis GN=adat2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.472e-17
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 2
Query:  236 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSD 604
            +M  A Q A+ AL++ EVPVGC+++   +V+                  M AID +LD  + N    +++   F    LYVT EPCIMCA AL +L I  + YGC NE+FGGCGS+L++   D
Sbjct:   13 WMHKAFQMAQDALNNGEVPVGCLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWCEMNSKKSTDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVSGDD 132          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: ADAT2_DANRE (tRNA-specific adenosine deaminase 2 OS=Danio rerio GN=adat2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2
Query:  236 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSL 592
            +M  A   A  AL++ EVPVGC+++ + ++I                  M A+D +LD W +  L + +  E   +  LYVT EPCIMCAAAL +L I  + YGC NE+FGGCGS+L +
Sbjct:   24 WMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD-WCR--LREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDV 139          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: TAD2_SCHPO (tRNA-specific adenosine deaminase subunit tad2 OS=Schizosaccharomyces pombe GN=tad2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 2
Query:  290 PVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSDS 607
            P  CV +  G+VI                  + AI+ +L+ +          A  F +  LYVT EPC+MCAAAL  L IK +Y+GC N++FGGCGS+ S++   S
Sbjct:  238 PGSCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYP---------ASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVFSINKDQS 334          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: Y196_STRP8 (Uncharacterized deaminase spyM18_0196 OS=Streptococcus pyogenes serotype M18 GN=spyM18_0196 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 2
Query:  236 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSDSKMLNR 622
            FM  A+++A+ +L   E+P+GCVI++DG++I                  M AI         N  +  E   +     L+VT EPC+MC+ A+ +  I  + YG +N+KFGG  S+  + L+D ++ +R
Sbjct:   11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI---------NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI-LTDERLNHR 129          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: TADA_STRP6 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M6 GN=tadA PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 2
Query:  236 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSDSKMLNR 622
            FM  A+++A+ +L   E+P+GCVI++DG++I                  M AI         N  +  E   +     L+VT EPC+MC+ A+ +  I  + YG +N+KFGG  S+  + L+D ++ +R
Sbjct:   11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI---------NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI-LTDERLNHR 129          
BLAST of EY711128 vs. ExPASy Swiss-Prot
Match: TADA_STRP3 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 GN=tadA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 2
Query:  236 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKELYYGCANEKFGGCGSILSLHLSDSKMLNR 622
            FM  A+++A+ +L   E+P+GCVI++DG++I                  M AI         N  +  E   +     L+VT EPC+MC+ A+ +  I  + YG +N+KFGG  S+  + L+D ++ +R
Sbjct:   11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI---------NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI-LTDERLNHR 129          
The following BLAST results are available for this feature:
BLAST of EY711128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADAT2_BOVIN3.685e-2143.31tRNA-specific adenosine deaminase 2 OS=Bos taurus ... [more]
ADAT2_HUMAN1.829e-2041.73tRNA-specific adenosine deaminase 2 OS=Homo sapien... [more]
ADAT2_MOUSE4.074e-2040.94tRNA-specific adenosine deaminase 2 OS=Mus musculu... [more]
ADAT2_XENTR1.712e-1842.02tRNA-specific adenosine deaminase 2 OS=Xenopus tro... [more]
ADAT2_XENLA2.472e-1739.84tRNA-specific adenosine deaminase 2 OS=Xenopus lae... [more]
ADAT2_DANRE6.088e-1640.34tRNA-specific adenosine deaminase 2 OS=Danio rerio... [more]
TAD2_SCHPO1.833e-1236.79tRNA-specific adenosine deaminase subunit tad2 OS=... [more]
Y196_STRP86.965e-1231.01Uncharacterized deaminase spyM18_0196 OS=Streptoco... [more]
TADA_STRP66.965e-1231.01tRNA-specific adenosine deaminase OS=Streptococcus... [more]
TADA_STRP36.965e-1231.01tRNA-specific adenosine deaminase OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711128 ID=EY711128; Name=EY711128; organism=Citrus sinensis; type=EST; length=917bp
AAAATCCTTCCATAGACAAATTCCCAACGTAGTATGCAATCTCTGACATT
TATATATAAATCTCTTTCATTGTATTTTATTTTAAATTTTTGCTTAATTC
GTTTATGAGTAGCTGGTAACTGTTAGATTGTAGAGACTCTGTTGTGATGC
ATGCAAAGTGTTTGATGAAATGCTTGTGAGAGTTGATTTATAGATGGCTT
CTTCTGGGGAAGAGTGGTCTCCTGATACTCTTGCATTTATGGATCTGGCA
ATACAACAGGCAAAACTTGCTTTGGACTCCCTTGAAGTGCCAGTTGGATG
TGTGATTCTGGAAGATGGAAAGGTCATTGCTGCTGGTCGAAATCGAACTA
CTGAGACAAGAAACGCTACAAGGCATGCAGAAATGGAAGCTATTGATGTT
CTTCTTGACCAGTGGCAGAAAAATGGACTCTCACAGTCAGAGATTGCTGA
AAAATTCTCGAAATGCTGCCTTTATGTAACATGTGAACCGTGTATTATGT
GTGCTGCTGCATTATCGATTCTTGGTATAAAGGAATTATACTATGGATGT
GCAAATGAGAAATTTGGAGGATGTGGATCGATACTGTCTCTGCATTTGAG
TGACTCTAAGATGCTGAATAGGTTTACTTTTTAACCTAGGATCAAAACTA
CATTTTCGNTTGTGCTGATCTTGTTATCATCATTGTGGNTAAACATCTGC
AATTCATCATGCAATTTAATAGAGTTAACTGGTCCCTGGGCCTTTACAAT
TTTTATATTCTGAACTTTTTGTTAGTGGTGATGTCCTTGGAGGGAAGGGT
CCAAATGTACAGGAGGATAATGGCATCCGAAGCAGTTCTCTGTTTCAAAG
TTCTTTAACAAGGGACCCCATGGGATAAGAGTGCTAACTTTACCTTAGCT
TCAATGGGAACTTGAAA
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