EY711125

Overview
NameEY711125
Unique NameEY711125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1008
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: ALKB8_MOUSE (Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.354e-16
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  435 SSSIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIG 647
            + S K   ELE+K+VH+VY+ IA HFSSTR + WP+   FL +LPS S+V D GCGNGK LG+  D + IG
Sbjct:  361 TESSKEALELEQKHVHQVYNEIASHFSSTRHSPWPRIVEFLKALPSGSIVADIGCGNGKYLGINKDLYMIG 431          
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: ALKB8_BOVIN (Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.034e-15
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  441 SIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIGVGYNPFLI 671
            S K   +LE+ YVHRVY+ IA HFSSTR   WP    FL +LPS SLV D GCGNGK LG+  + + IG  ++  L+
Sbjct:  363 SDKEALQLEQDYVHRVYEEIARHFSSTRHTPWPHIVEFLKALPSGSLVADIGCGNGKYLGINNELYMIGCDHSQNLV 439          
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: ALKB8_XENTR (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis GN=alkbh8 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.532e-15
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  462 LEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIG 647
            LE++YVH+VYD IA HFSSTR   WPK   FL SLP  SLV D GCGNGK LG+  D   IG
Sbjct:  369 LEREYVHKVYDDIAGHFSSTRHTPWPKIGDFLASLPKGSLVADVGCGNGKYLGVNKDLCMIG 430          
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: TRM9_YEAST (tRNA (uracil-5-)-methyltransferase TRM9 OS=Saccharomyces cerevisiae GN=TRM9 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.319e-14
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  444 IKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIG 647
            I    E E++YVH+VY+ IAPHFS TR+  WP    FL + P  S+ +D GCGNGK LG+ PD + IG
Sbjct:    3 INQAAEKEQEYVHKVYNEIAPHFSQTRYKPWPIVTQFLKTRPMGSIGIDVGCGNGKYLGVNPDIYIIG 70          
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: ALKB8_HUMAN (Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens GN=ALKBH8 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.319e-14
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 3
Query:  441 SIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIG 647
            S K    LE++YVH+VY+ IA HFSSTR   WP    FL +LPS S+V D GCGNGK LG+  + + IG
Sbjct:  363 SDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIG 431          
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: ALKB8_MACFA (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis GN=ALKBH8 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.544e-14
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 3
Query:  441 SIKSTPELEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIG 647
            S +    LE++YVH+VY+ IA HFSSTR   WP    FL +LPS S+V D GCGNGK LG+  + + +G
Sbjct:  363 SDEEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGVNKELYMVG 431          
BLAST of EY711125 vs. ExPASy Swiss-Prot
Match: YAZ3_SCHPO (Uncharacterized protein C13D6.03c OS=Schizosaccharomyces pombe GN=SPAC13D6.03c PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 3
Query:  459 ELEKKYVHRVYDAIAPHFSSTRFAKWPKSATFLNSLPSSSLVLDAGCGNGKDLGLKPDCFFIG 647
            E E +YVH+VYD IA HFS TR+  WP    FL SLP  S+ +D GCGNGK   + P+ + IG
Sbjct:    4 EYENEYVHQVYDKIATHFSDTRYKPWPVVEKFLKSLPLGSVGVDIGCGNGKYQKVNPNVYMIG 66          
The following BLAST results are available for this feature:
BLAST of EY711125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ALKB8_MOUSE5.354e-1654.93Alkylated DNA repair protein alkB homolog 8 OS=Mus... [more]
ALKB8_BOVIN2.034e-1551.95Alkylated DNA repair protein alkB homolog 8 OS=Bos... [more]
ALKB8_XENTR4.532e-1562.90Alkylated DNA repair protein alkB homolog 8 OS=Xen... [more]
TRM9_YEAST1.319e-1451.47tRNA (uracil-5-)-methyltransferase TRM9 OS=Sacchar... [more]
ALKB8_HUMAN1.319e-1453.62Alkylated DNA repair protein alkB homolog 8 OS=Hom... [more]
ALKB8_MACFA6.544e-1450.72Alkylated DNA repair protein alkB homolog 8 OS=Mac... [more]
YAZ3_SCHPO3.591e-1252.38Uncharacterized protein C13D6.03c OS=Schizosacchar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-A11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711125 ID=EY711125; Name=EY711125; organism=Citrus sinensis; type=EST; length=1008bp
ATTATTTATTTCCAAGCACAACAACCACCCCNCNNCNNANNNNNNCCACT
GGTCCCCCTTGTCACTATTCCGAGACTCACTTTACCGACCCACGCGTCCG
CGGACGCGTGTTCGCACGCGTGGGCCGTACAGTACACCTTCTGTTGTAAC
CCTAAGCCTAATCGCTGAGATGTGAACTGAATCAGTGCCACGCCTGAGTT
GGTTCTATGCTTCAAGCTGCTGTTTTTGATGTTCTAAGGGCAACTAGATG
CTTTCATAAATTTTGGGAGCCATTCTCTGTACCCATTACCTGTGGTAATT
GTGTTTTTCATCCAGGAATTTCTGGAACTATGAGAGAAGTTAAAGTAAAA
GGTGCTTCTGATTTTTGTACCCTTGGAGCTGATGGAGCATCTAGCATTCA
TTCTGTATCTACAGGGGAGGACCAGCGATGCTCATCCTCAAGCATAAAAT
CTACTCCTGAATTAGAAAAGAAGTATGTCCATCGTGTTTATGATGCCATA
GCTCCCCATTTCAGTTCCACTCGTTTCGCTAAGTGGCCAAAAAGTGCCAC
TTTTTTGAATTCTTTGCCTTCAAGCTCTCTTGTCTTGGATGCAGGTTGTG
GAAATGGGAAGGATTTGGGTTTAAAACCGGATTGCTTCTTCATCGGGGTG
GGATACAACCCTTTCCTAATTCACAATTTCGCCGGAAAGGGGGCATGAAG
TTTTGGCTTGCAATGCTGGTAAACTCCCCTAAAAATCTGAAATTTGACAA
GCCAGCCATCTCTTTAGCGGGATTACATTATCTGAGCACTGAAAATCCGA
GACAGAAGAAATTGTAGAATTACTAAGGGTGTTCAAACAGGTGACCTTAT
TCTATAAACACCCGGGCAGTGAAACAGAAGGATAATCTATTAGTACCAAA
TGGGCCCCTCCTTTCCCCACATTCTCGGCAAAAGGGCTCGGCCCCTGGAT
CTCTCGATATTCTTGCCCCTCCATCCAACTAAATAGATTTCCAATACCAG
AGGAATGA
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