EY711120

Overview
NameEY711120
Unique NameEY711120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8031 contig Csv1_Contig8031:51..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.622e-74
Identity = 151/254 (59.45%), Postives = 171/254 (67.32%), Query Frame = 3
Query:   54 IAEGDKEDVDLAVKAALQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            IAEGDKEDVDLAV AA  AFDHGPWPR +G ER  ++ KFAD                 GKL    K  DIP  A   RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF  KV+PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DKV                                 SFTGSTDVGR++MQAAA SNLK VSL+LGG
Sbjct:   51 IAEGDKEDVDLAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKV---------------------------------SFTGSTDVGRKIMQAAAASNLKKVSLELGG 271          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.884e-56
Identity = 121/262 (46.18%), Postives = 147/262 (56.11%), Query Frame = 3
Query:   27 PRVRRSNFRIAEGDKEDVDLAVKAALQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            PR       +AEGD ED++ AVKAA  AFD GPWP+ S  ER  ++L+FAD                 GK +  +   +IP  A   RYYAG ADKIHG  +      Q +TL EPIGV G IIPWNFP  MF  KV PALA G T+++K AEQTPL A Y   L   AG+P GVLN+V GFG TAGAA+ASHMD+DK+                                 +FTGSTD G+ ++  AA SNLKPV+L+LGG
Sbjct:   80 PRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKL---------------------------------AFTGSTDTGKVILGLAANSNLKPVTLELGG 308          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.368e-55
Identity = 122/263 (46.39%), Postives = 148/263 (56.27%), Query Frame = 3
Query:   27 PRVRRSNFRIAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            P       ++ EGDKEDVD AVKAA QAF  G PW     +ER  ++ K AD                 GKL+S A + D+ G   TLRY AG ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV                                 +FTGST+VG+ + +AA  SNLK V+L+LGG
Sbjct:   43 PATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKV---------------------------------AFTGSTEVGKLIKEAAGKSNLKRVTLELGG 272          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.435e-54
Identity = 122/263 (46.39%), Postives = 146/263 (55.51%), Query Frame = 3
Query:   27 PRVRRSNFRIAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            P        + EGDKEDVD AVKAA QAF  G PW     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAEQTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV                                 +FTGST+VG+ + +AA  SNLK VSL+LGG
Sbjct:   43 PATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKV---------------------------------AFTGSTEVGKLIKEAAGKSNLKRVSLELGG 272          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.435e-54
Identity = 122/263 (46.39%), Postives = 146/263 (55.51%), Query Frame = 3
Query:   27 PRVRRSNFRIAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            P        + EGDKEDVD AVKAA QAF  G PW     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAEQTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV                                 +FTGST+VG+ + +AA  SNLK VSL+LGG
Sbjct:   43 PATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKV---------------------------------AFTGSTEVGKLIKEAAGKSNLKRVSLELGG 272          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 4.153e-54
Identity = 121/263 (46.01%), Postives = 147/263 (55.89%), Query Frame = 3
Query:   27 PRVRRSNFRIAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            P       ++ EGDK DVD AVKAA QAF  G PW     +ER  ++ K AD                 GKL+S A + D+ G   TLRY AG ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV                                 +FTGST+VG+ + +AA  SNLK V+L+LGG
Sbjct:   43 PATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKV---------------------------------AFTGSTEVGKLIKEAAGKSNLKRVTLELGG 272          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 210.305 bits (534), Expect = 1.208e-53
Identity = 118/254 (46.46%), Postives = 146/254 (57.48%), Query Frame = 3
Query:   54 IAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            + EGDK DVD AVKAA QAF  G PW     +ER  ++ K AD                 GK+ + A + D+ G    L+Y AG ADKIHG+ +     +  YT REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV                                 +FTGST VG+ + +AA  SNLK V+L+LGG
Sbjct:   52 VEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKV---------------------------------AFTGSTQVGKLIKEAAGKSNLKRVTLELGG 272          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.208e-53
Identity = 118/254 (46.46%), Postives = 145/254 (57.09%), Query Frame = 3
Query:   54 IAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            +AEGDK D+D AVKAA +AF+ G PW     +ER  ++ K AD                 GKL S A + D+     T+RY AG ADKIHG  + M      +T  EP+GV G IIPWNFP  MF  K++PAL  G T++VKPAEQTPL ALY   L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKV                                 SFTGST+VG+ + +AA  +NLK V+L+LGG
Sbjct:   60 VAEGDKADIDKAVKAARKAFELGSPWRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKV---------------------------------SFTGSTEVGKLIKEAAGKTNLKRVTLELGG 280          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 2.692e-53
Identity = 117/254 (46.06%), Postives = 147/254 (57.87%), Query Frame = 3
Query:   54 IAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            + EGDK DVD AVKAA QAF  G PW     +ER  ++ K AD                 GK+ + A + D+ G+   L+Y AG ADKIHG+ +     +  +T REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV                                 +FTGST VG+ + +AA  SNLK V+L+LGG
Sbjct:   52 VEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKV---------------------------------AFTGSTQVGKLIKEAAGKSNLKRVTLELGG 272          
BLAST of EY711120 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.997e-53
Identity = 121/254 (47.64%), Postives = 143/254 (56.30%), Query Frame = 3
Query:   54 IAEGDKEDVDLAVKAALQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVTSN*KEYIAQTASFNKFM*LLDFQFCGLGLFQGSFTGSTDVGRQVMQAAATSNLKPVSLKLGG 812
            I EGDK DVD AVKAA QAF  G PW     +ER  ++ K AD                 GKL   A + D+ G   TLRY AG ADKI G  + M      YT  EP+GV G IIPWNFP  M   K+ PAL+ G T+IVKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV                                 +FTGST+VG+ + +AA  SNLK V+L+LGG
Sbjct:   47 IEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKV---------------------------------AFTGSTEVGKLIKEAAGKSNLKRVTLELGG 267          
The following BLAST results are available for this feature:
BLAST of EY711120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
AL2C4_ARATH1.622e-7459.45Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
AL2B4_ARATH9.884e-5646.18Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL1A1_HUMAN8.368e-5546.39Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_SHEEP2.435e-5446.39Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
AL1A1_BOVIN2.435e-5446.39Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
AL1A1_MACFA4.153e-5446.01Retinal dehydrogenase 1 OS=Macaca fascicularis GN=... [more]
AL1A1_MOUSE1.208e-5346.46Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
AL1A1_CHICK1.208e-5346.46Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
AL1A1_RAT2.692e-5346.06Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL1A1_RABIT5.997e-5347.64Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-A05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711120 ID=EY711120; Name=EY711120; organism=Citrus sinensis; type=EST; length=898bp
GACACTATNCCGGAATCTTATCCCGACCACGCGTCCGGAGAAGCAATTTC
CGAATTGCTGAAGGAGACAAGGAGGATGTTGATCTTGCCGTCAAGGCAGC
ACTTCAGGCGTTTGATCACGGTCCATGGCCACGTTTTTCTGGAGCCGAAA
GGAGAGGGATAATGTTGAAGTTTGCGGACTTAATTGAAGAACACGCAGAG
GTATTAGCGGTGCTGGAAGCTCTTGATGCTGGCAAATTGCACAGTTGGGC
CAAAATGGGCGACATTCCAGGAGCTGCTAATACCCTTCGTTACTATGCTG
GTGCAGCTGATAAAATACACGGAGAGGTTCTAAAAATGTCTCGGGCGTTA
CAGGGCTACACGTTGCGTGAGCCAATTGGCGTTGTTGGACACATCATTCC
CTGGAATTTTCCTACCACCATGTTTTTCATGAAGGTTAGCCCTGCGTTAG
CCGCTGGGTGCACAATGATTGTCAAGCCTGCTGAGCAAACTCCCCTTATT
GCTCTTTATTTTGCCCATCTTGCCAAGCTGGCTGGAGTACCTGATGGAGT
GCTTAATGTTGTACCTGGATTTGGACCAACTGCTGGTGCTGCCATCGCCT
CCCATATGGACATTGATAAAGTAACATCCAATTAAAAAGAGTATATTGCA
CAAACTGCTAGCTTCAATAAGTTCATGTGACTATTGGATTTTCAATTCTG
CGGGCTTGGGCTTTTTCAGGGTAGTTTTACAGGGTCTACGGATGTCGGAC
GTCAAGTGATGCAGGCCGCAGCAACAAGCAACTTGAAGCCAGTTTCACTA
AAATTAGGTGGCAGTCACCTCTCTTGATTTTTGATGATGTTGATGTAAAC
ACAGCTGCAAACATGGCGCTTCTGGGCATCCTGTTTAACAGGGAAGAT
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