EY711118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 8.902e-110 Identity = 207/253 (81.82%), Postives = 222/253 (87.75%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD+GNLT+ GE MSEFPLDPQMSKML+ SP++NCSNEILS+SAMLSVPNCFVRPREAQKAADEAK++ + H G L YKQ +NFVN+RA+KSA N + L R Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKAR-FGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVR 597
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_PONAB (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Pongo abelii GN=DHX15 PE=2 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 1.168e-93 Identity = 175/253 (69.17%), Postives = 207/253 (81.82%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+AMLSVP CFVRP EA+KAADEAK + ++H G L +KQ DNF+N+R+L SA N + L R Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR-FAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSR 666
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_MOUSE (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus GN=Dhx15 PE=2 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 1.168e-93 Identity = 175/253 (69.17%), Postives = 207/253 (81.82%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+AMLSVP CFVRP EA+KAADEAK + ++H G L +KQ DNF+N+R+L SA N + L R Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR-FAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSR 666
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens GN=DHX15 PE=1 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 1.168e-93 Identity = 175/253 (69.17%), Postives = 207/253 (81.82%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+AMLSVP CFVRP EA+KAADEAK + ++H G L +KQ DNF+N+R+L SA N + L R Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR-FAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSR 666
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_STRPU (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 (Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 9.889e-93 Identity = 173/253 (68.38%), Postives = 206/253 (81.42%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLVSPISKASA QR GRAGRT+PGKCFRLYTEK++++++Q TYPEILRSNL VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYLGALDD G+LT +G M+EFPLDPQ++KM++ S Y+CSNEILS++AMLSVP CF+RP EA+K ADEAK + ++H G L +KQ DNF+ +R+LKSA + + L R Sbjct: 183 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTAMLSVPQCFLRPNEAKKLADEAKMR-FAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQYRSLKSADSVRQQLAR 434
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_CAEEL (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.520e-88 Identity = 166/253 (65.61%), Postives = 202/253 (79.84%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV PISKASA QR+GRAGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG +DLVHFDFMDPPAPETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S + NCSNEILSI+AMLSVP C+VRP E + ADEAK++ ++H G L +KQ DNF+N+R +K+A + L R Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKAR-FAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSR 610
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_SCHPO (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 OS=Schizosaccharomyces pombe GN=prp43 PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.615e-88 Identity = 166/254 (65.35%), Postives = 203/254 (79.92%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFRS 807 RK+V+STNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+GRAGRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDPPAPET+MRALE LNYL LDD+G+LT +G K SEFPLDP ++ ML+ SP++ CSNE+LS++A+LSVPN FVRP A+K ADE + Q ++H G L YK ++F++HRAL SA N + L R+ Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQ-FTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRT 604
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRP43_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 OS=Saccharomyces cerevisiae GN=PRP43 PE=1 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.171e-85 Identity = 163/257 (63.42%), Postives = 205/257 (79.77%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WG--IPLHS*MYTMLYKQTWR--IHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK+V+STNIAETSLTIDGIVYV+DPGF+KQKVYNPR+RVESLLVSPISKASA QR+GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHFDFMDPPAPET+MRALE LNYL LDD+GNLT +G S+FPLDP ++ ML+ S ++ CS EIL+I AMLSVPN F+RP + +K AD+AK+ +++H G I L + + + + IH D+++N+R+L +A N + L R Sbjct: 370 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKN-IFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLER 625
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX15_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 4.449e-85 Identity = 163/253 (64.43%), Postives = 198/253 (78.26%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSLFR 804 RK +VSTNIAETSLTIDGIV+V+DPGF+KQK YNPR RVESLLV+PISKASA+QR+GRAGRT+PGKCFRLYTEK+F + QT+PEILRSNLA+ VL L KLG+ DLVHFDFMDPP P+TL+RALEVL+YLGALDD+G LTE+G MSEFPLDPQ+SKML+ S + +CSNEIL+I+AMLS PNCF+RP++ + AD AK + H G L +K+ DNF+NHRA+K A + + L R Sbjct: 342 RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKS-FDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLAR 593
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.896e-70 Identity = 136/255 (53.33%), Postives = 186/255 (72.94%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVN----DNFVNHRALKSAGNGKHSL 798 RK+V++TNIAETSLTIDGI YVIDPGF+KQK +NP+ ++SL+V+PIS+A+A QRSGRAGRT PGKC+RLYTE +F N++ + PEI R+NL NTVLT+K +GI+DL++FDFMDPP +TL+ A+E L LGALD++G LT +G KM+EFPLDPQ+SKML+ S CS+EIL++ AMLSV N F RP+E Q AD+ K++ + P + + ++W+ N +NFV R+L+ A + + L Sbjct: 776 RKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQ-----PEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQL 1025 The following BLAST results are available for this feature:
BLAST of EY711118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711118 ID=EY711118; Name=EY711118; organism=Citrus sinensis; type=EST; length=883bpback to top |