EY711105

Overview
NameEY711105
Unique NameEY711105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:1184..1800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    7 VRKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            V KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDPTG
Sbjct:  364 VTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 1
Query:    7 VRKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            V KIDRRSGKELEKEPKFLKNGDAGMVKM+PTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct:  364 VTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.100e-33
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    7 VRKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            + KIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct:  364 ITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_PEA (Elongation factor 1-alpha OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.100e-33
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 1
Query:    7 VRKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            + KIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct:  364 ITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.980e-33
Identity = 67/71 (94.37%), Postives = 71/71 (100.00%), Query Frame = 1
Query:   13 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            KIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+V+KKDPTG
Sbjct:  366 KIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.980e-33
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1
Query:   13 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            KIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDPTG
Sbjct:  366 KIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.361e-32
Identity = 66/71 (92.96%), Postives = 71/71 (100.00%), Query Frame = 1
Query:   13 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGV+K+V+KKDPTG
Sbjct:  366 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.361e-32
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 1
Query:   13 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            KIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG
Sbjct:  366 KIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.322e-32
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 1
Query:   13 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            KIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETF  YPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct:  366 KIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436          
BLAST of EY711105 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.032e-32
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1
Query:   13 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 225
            KIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP+G
Sbjct:  366 KIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 436          
The following BLAST results are available for this feature:
BLAST of EY711105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
EF1A_ORYSJ9.426e-3495.89Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_MAIZE9.426e-3495.89Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]
EF1A_VICFA2.100e-3393.15Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_PEA2.100e-3393.15Elongation factor 1-alpha OS=Pisum sativum PE=2 SV... [more]
EF1A_TOBAC7.980e-3394.37Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_SOYBN7.980e-3395.77Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_SOLLC1.361e-3292.96Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A_ARATH1.361e-3294.37Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A2_DAUCA2.322e-3295.77Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]
EF1A_MANES3.032e-3295.77Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-G12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711105 ID=EY711105; Name=EY711105; organism=Citrus sinensis; type=EST; length=616bp
CCACGCGTCCGGAAGATTGATAGGCGATCAGGCAAGGAGCTTGAGAAGGA
GCCCAAGTTCTTGAAGAATGGAGATGCCGGAATGGTTAAGATGATTCCCA
CCAAGCCCATGGTTGTTGAGACATTCTCCGACTACCCACCCCTTGGTCGT
TTTGCTGTTAGGGACATGCGTCAGACTGTTGCTGTGGGTGTTATCAAGAG
TGTTGAGAAGAAGGATCCCACAGGTGCCAAGGTCACCAAGTCCGCAGCCA
AGAAGAAATGAGAAATTTTTATGGGTCTGTCTACAATAGTTAGGGTTTAT
TTTCTGTCTTTTTTATTTTCTTTTCTGTTTTTGTTTTGCATCAATGTTTC
TGCAAACAGCCCTATTTGCTTCCACCAGTTTGCTGTTGAGCAATTGGGAT
GTTATCTTTCTGCTTAACTGGCTGTCGTGGGGGTTCGGATTTTTATATTC
TGAATTTGGTTAATAGCACTAAATTGAGTTGTGAAGTTTATAGACCAGCT
GCTGGATGTCAAAGTTGGTGGTTTTAATACATTTGGAAGCTCATTTTAAG
CTCTTTGATTATTATCCTTATCAATTTCAAAATACCTATAGTTTTACATT
AAAAAAAAAAAAAAAA
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