EY711101

Overview
NameEY711101
Unique NameEY711101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7802 contig Csv1_Contig7802:255..1162. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP_SOYBN (Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.819e-35
Identity = 72/234 (30.77%), Postives = 98/234 (41.88%), Query Frame = 2
Query:    8 SDHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDD--FRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKFKGPTGGDDVEMQDEDAPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAAYKKKN 703
            S+HVLYSNRSAA           +  +KTV+LKPDW K YSRLGAAHLGL+ + +A    K   + +P+N                          +PF +AF+GP+MWA+    P T  ++       R         P  +    + QRVM A+GVLLNVK + P   ++    D+D  +                                          AGNAAYKKK+
Sbjct:   34 SNHVLYSNRSAATLP-PELRGGPSRRQKTVDLKPDWPKAYSRLGAAHLGLRRHRDASPPTKPASNSNPDN------AALKSGLADAQAAASRPPPTSPFATAFSGPDMWAR---SPPTPPHVQPPGPRVRQDHAGHPEGPQQVQPAFEYQRVMHAIGVLLNVKIQTPNHDENDHDADDDVSEDEVVSQPEPEHEPEAAVEVAEEEEEEEKETRDRKGQAQKEKEAGNAAYKKKD 257          

HSP 2 Score: 76.6406 bits (187), Expect = 3.819e-35
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 3
Query:  720 HYSSALELDDEDISYLTNRAAXYLEMGQYXECIXDCDXAVXRGXEL 857
            HYS ALELDDEDISYLTNRAA YLEMG++ +CI DC+ AV RG EL
Sbjct:  264 HYSKALELDDEDISYLTNRAAVYLEMGKFEDCIKDCEKAVERGKEL 309          

HSP 3 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 44/150 (29.33%), Postives = 66/150 (44.00%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVM 460
            D   YSNR+A +  L    + L DA+K +EL P +SKGY+R GA    +++Y +A+ +Y++GL  DPNN+                                   E  AK   DP  +S L       ++ D Q NP     ++K+  VM
Sbjct:  414 DAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKGAVQFSMKEYDKALETYREGLKHDPNNQELLDGIRRCVEQINKASRGDFTPEEL--------KERQAKAMQDPEIQSILQDPVMTQVLTDFQENPRAAEEHVKNPMVM 555          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STI1_SCHPO (Heat shock protein sti1 homolog OS=Schizosaccharomyces pombe GN=sti1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.043e-24
Identity = 69/184 (37.50%), Postives = 98/184 (53.26%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPF---GSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKFK---GPTGGDDVEMQDEDAP 544
            +H+LYSNRSA +AS  +YADAL DA K  ELKPDW+KG+SR GAA  GL D   A ++Y++GL  D NN                          NPF   GS  + P+   KL ++P T S L    F   ++ IQ+NP ++   L D R+M+ +G+L+ +      G    ++ E ++E AP
Sbjct:   35 NHILYSNRSACYASEKDYADALKDATKCTELKPDWAKGWSRKGAALHGLGDLDAARSAYEEGLKHDANN--AQLLNGLKSVEAAQTQAASGAGGFNPFAKLGSQLSDPKFMEKLASNPETASLLADSAFMAKLQKIQQNPGSIMAELNDPRMMKVIGMLMGIDINMNAGEGAAEEQEKKEEFAP 216          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 62/159 (38.99%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 487
            +HVLYSNRSAA+A   +Y  A  D  KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                            F + F  P ++ KL  DP TRS L    +R +++ +Q  P++L   L+D RVM  L VLL V
Sbjct:   37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------LQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRSLLSDPTYRELIEQLQNKPSDLGTKLQDPRVMTTLSVLLGV 185          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_MACFA (Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21
Identity = 60/159 (37.74%), Postives = 83/159 (52.20%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 487
            +HVLYSNRSAA+A   +Y  A  D  KTVELKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                            F + F  P ++ KL +DP TR+ L    +R +++ ++  P++L   L+D R+M  L VLL V
Sbjct:   37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVELKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------PQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQDPRIMTTLSVLLGV 185          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.152e-21
Identity = 61/159 (38.36%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 487
            +HVLYSNRSAA+A   +Y  A  D  KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                            F + F  P ++ KL  DP TR+ L    +R +++ +Q  P++L   L+D RVM  L VLL V
Sbjct:   37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------LQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRTLLSDPTYRELIEQLQNKPSDLGTKLQDPRVMTTLSVLLGV 185          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.035e-21
Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 487
            +HVLYSNRSAA+A   +Y  A  D  KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                            F + F  P ++ KL +DP TR+ L    +R +++ ++  P++L   L+D R+M  L VLL V
Sbjct:   37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------PQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQDPRIMTTLSVLLGV 185          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20
Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 487
            +HVLYSNRSAA+A   +Y  A  D  KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                            F + F  P ++ KL +DP T++ L    +R +++ ++  P++L   L+D R+M  L VLL V
Sbjct:   37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKQTYEEGLKHEANN----------PQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTKTLLADPTYRELIEQLRNKPSDLGTKLQDPRIMTTLSVLLGV 185          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.988e-20
Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 487
            +HVLYSNRSAA+A   +Y  A  D  KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                            F + F  P ++ KL  DP TR+ L    +R +++ ++  P++L   ++D R+M  L VLL V
Sbjct:   37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------LQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRTLLSDPTYRELIEQLRNKPSDLGTKIQDPRIMTTLSVLLGV 185          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STIP1_DICDI (Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19
Identity = 63/166 (37.95%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    8 SDHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKF-KGP 502
            S+H+LYSNRSA+  +L    DAL DAKK +ELKPDWSKGY R   A   L  + EA  S + GL IDP N+                         +   + F+   +  KL  +P T  +  Q DF  +M  I +NP+  + Y+ DQR    LGVLL V   +GP
Sbjct:   40 SNHILYSNRSASLLALDKNEDALTDAKKAIELKPDWSKGYLRETNALYKLGRFEEAEKSAEAGLKIDPTNQ-----QLEDALEDAQYATTGAKDPASAMANLFSAQNL-TKLRFNPKTAPFFQQPDFVAIMDQISKNPSLFSQYIADQRFSTCLGVLLGVDINQGP 199          

HSP 2 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 46/158 (29.11%), Postives = 69/158 (43.67%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLN 484
            DH +YSNRSAA++ L  Y  A+ DA K +EL+P + KGY R G A   +++Y +A+  Y +GL I+ NN                              S     E   +   DP  +  L       ++KD+  NP     +LK+  +M     L+N
Sbjct:  412 DHTIYSNRSAAYSKLLEYKLAIKDADKCIELEPTFIKGYIRKGTALFAMREYQQALEVYDQGLRIEANN------------PELLDLSRKTVAALTKLQSTLTDEERLQQAAKDPEIQKILSDPIMNQILKDMSENPAAAQDHLKNPLIMAKFQKLVN 557          
BLAST of EY711101 vs. ExPASy Swiss-Prot
Match: STI1_YEAST (Heat shock protein STI1 OS=Saccharomyces cerevisiae GN=STI1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.315e-18
Identity = 55/160 (34.38%), Postives = 79/160 (49.38%), Query Frame = 2
Query:   11 DHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYL-KDQRVMQALGVLLNV 487
            +HVLYSNRSA + SL  ++DAL DA + V++ P WSKGY+RLGAAHLGL D  EA ++YKK L++D +N+                               FA P +   L  +P T   +        +   ++NP  +   L  D R+M  +  L+ V
Sbjct:   39 NHVLYSNRSACYTSLKKFSDALNDANECVKINPSWSKGYNRLGAAHLGLGDLDEAESNYKKALELDASNKAAKEGLDQVHRTQQARQAQPDLG----LTQLFADPNLIENLKKNPKTSEMMKDPQLVAKLIGYKQNPQAIGQDLFTDPRLMTIMATLMGV 194          
The following BLAST results are available for this feature:
BLAST of EY711101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
STIP_SOYBN3.819e-3530.77Heat shock protein STI OS=Glycine max GN=STI PE=2 ... [more]
STI1_SCHPO2.043e-2437.50Heat shock protein sti1 homolog OS=Schizosaccharom... [more]
STIP1_MOUSE2.762e-2138.99Stress-induced-phosphoprotein 1 OS=Mus musculus GN... [more]
STIP1_MACFA3.607e-2137.74Stress-induced-phosphoprotein 1 OS=Macaca fascicul... [more]
STIP1_RAT6.152e-2138.36Stress-induced-phosphoprotein 1 OS=Rattus norvegic... [more]
STIP1_HUMAN8.035e-2137.11Stress-induced-phosphoprotein 1 OS=Homo sapiens GN... [more]
STIP1_BOVIN3.053e-2036.48Stress-induced-phosphoprotein 1 OS=Bos taurus GN=S... [more]
STIP1_CRIGR3.988e-2036.48Stress-induced-phosphoprotein 1 OS=Cricetulus gris... [more]
STIP1_DICDI1.160e-1937.95Protein STIP1 homolog OS=Dictyostelium discoideum ... [more]
STI1_YEAST8.315e-1834.38Heat shock protein STI1 OS=Saccharomyces cerevisia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-G07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711101 ID=EY711101; Name=EY711101; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGATCACGTGCTGTATTCCAATCGATCCGCCGCGCACGCTT
CTCTCCACAACTACGCCGACGCCTTAGCCGACGCCAAGAAGACCGTCGAG
CTTAAGCCGGACTGGTCCAAAGGCTACAGCCGACTTGGCGCTGCTCACCT
CGGATTACAGGACTATATCGAAGCTGTTAACTCCTACAAGAAAGGACTTG
ATATCGATCCTAACAATGAAGCCCTCAAATCCGGCTTGGCCGATGCTAAA
GCGGCGGCCTCCGCGTCGTTCAGATCTCGTTCCCCGCCGGCCGATAATCC
ATTTGGTTCTGCTTTTGCCGGACCTGAGATGTGGGCAAAATTAACGGCGG
ATCCGACTACGAGAAGTTATCTCGACCAAGATGATTTTCGTAATATGATG
AAGGATATTCAGAGAAATCCTAACAACTTAAACTTATACTTGAAGGACCA
GCGGGTGATGCAGGCTTTGGGGGTTTTATTAAATGTGAAGTTTAAGGGGC
CCACTGGTGGTGATGACGTGGAAATGCAGGACGAAGATGCCCCAAAAGGA
CCGGAGACGTCTAAGGAGGAGACGAGGAAGCCGGAGTCTGAGCCCGAGCC
TGAGCCAATGGAGCTGACGGAGGAGGAGAAGGAAGCTAAGGAAAGAAAAG
AAAAGGCATTGAAGGAGAAAGAGGCGGGAAACGCTGCTTATAAGAAGAAG
AATTTGAGAAAGCAATTGACATTACTCCAGTGCACTGGAGCTCGATGATG
AGGATATTTCTTACCTGACTAATCGTGCGGCGGNTTATCTTGAAATGGGG
CAGTATGANGAATGCATCANGGATTGTGACNAGGCTGTCNAAAGGGGAAN
AGAGCTANATCTGACTTTAGATGATAGCAGAGCTTTACTANGAAGGAACT
GCTCTG
back to top