EY711095

Overview
NameEY711095
Unique NameEY711095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711095_ssr251 microsatellite EY711095_ssr251:251..262. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.964e-34
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 1
Query:  187 RPATFLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQRA-TEISIKRKTPK*NRVNFWLNSSAHYHHLTFIWKH 576
            RPATF+EDFK  W+++H+ Q++ G+AIQLVL+Q++GCG ASKR+YLFGRVSMKIK +P +SAG  TAFYM  +T  VR E+  E L NR+G+P    T I    K  +  RVN W + S  YH  T +W H
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSH 161          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.821e-32
Identity = 67/131 (51.15%), Postives = 87/131 (66.41%), Query Frame = 1
Query:  187 RPATFLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQRA-TEISIKRKTPK*NRVNFWLNSSAHYHHLTFIWKH 576
            RPA F +DF++ W+D H+ QI GGRAIQL L+ +SGCG ASK+QYLFGRVSMKIK +P +SAG  TAFYM  +T++VR E+  E L NR+G+P    T +    K  +  RVN W + S  +H     W H
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNH 160          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 1
Query:  199 FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            F ++++ +WA  H+  + GG  + LVL+++SG G  SK+ YLFG  SMK+K +  +SAG  TAFY++ N      EI  E L NRTG+P    T +    K  +  R+  W + +  YH  + +W
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLW 155          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16
Identity = 48/125 (38.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query:  199 FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            F  ++  TWA  H+  + GG  IQL L++ +G G  SK  YLFG  SM IK +P +SAG  TAFY++ +T     EI  E L NRTG+P    T +    K  +  R+  W + +  YH  + +W
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLS-STNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLW 154          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.548e-16
Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  184 RRPAT--FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            RRP    F ++++ +WA  H+  + GG    L+L+++SG G  SK+ YLFG  SMK++ +  +SAG  TAFY++ N      EI  E L NRTG+P    T +    K  +  R+  W + +  YH  + +W
Sbjct:   26 RRPVDVPFWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLW 156          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.117e-15
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 1
Query:  184 RRPAT--FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENV-RKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            RRP    F  ++  TWA  H+    GG  IQL L++ +G G  SK  YLFG  SM IK +P +SAG  TAFY  L+++N    EI  E L NRTG+P    T +    K  +  R+  W + +  YH  + +W
Sbjct:   26 RRPVDVQFGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFY--LSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILW 156          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 48/125 (38.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query:  199 FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            F  ++  TWA  H  Q+ GG  +QL+L++ +G G  SK  YLFG  SM IK    ++AG  TAFY++ +T N   EI  E L NRTG+P    T +    K  +  R+  W + S  YH  + +W
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLS-STNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLW 157          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  199 FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            F  ++  TWA  H  Q  GG  +QL+L++ +G G  SK  YLFG  SM IK    ++AG  TAFY++ +T N   EI  E L NRTG+P    T +    K  +  R+  W + S  YH  + +W
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLS-STNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILW 158          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  199 FLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQ-RATEISIKRKTPK*NRVNFWLNSSAHYHHLTFIW 570
            F  ++  TWA  H+  + GG  + LVL++ +G G  SK  YLFG  SM IK +  +SAG  TAFY++ +  +   EI  E L NRTG+P    T +       +  R+N W + S  YH  + +W
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLS-SQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLW 155          
BLAST of EY711095 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1
Query:  193 ATFLEDFKVTWADAHLMQIQGGRAIQLVLEQNSGCGVASKRQYLFGRVSMKIKPLPENSAGNCTAFYMTLNTENVRKEI*LETLRNRTGEPQRA-TEISIKRKTPK*NRVNFWLNSSAHYHHLTFIWKHPQ 582
            A F  D ++TW D        G  + L L+++SG G  SK +YLFG+VSM++K +P NSAG  T  Y+  +      EI  E L N +GEP    T +  + K  K  +   W + +A++H  T +W +PQ
Sbjct:   21 ANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLK-SPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILW-NPQ 149          
The following BLAST results are available for this feature:
BLAST of EY711095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
XTH6_ARATH6.964e-3453.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH3.821e-3251.15Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC5.923e-1736.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN5.014e-1638.40Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_SOLLC6.548e-1635.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.117e-1539.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB3.250e-1538.40Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH4_ARATH3.250e-1538.40Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH4.244e-1536.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH4.244e-1535.88Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-G01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711095 ID=EY711095; Name=EY711095; organism=Citrus sinensis; type=EST; length=811bp
CCCACGCGTTCTGCCCACGCGTCCGCGGCATACATAACCACAACATATAA
TTAAAGTTCTCTTTCTAATTAGTAACAGATAATATTTTATTGTACGGCTT
GTTTTACAGCTATGGCTATCCTAAGAAATGCAATAGCATTATTTGTGTTG
CTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAAGGCGACCGGCTACTTT
TCTTGAGGATTTTAAAGTCACATGGGCCGATGCCCATCTCATGCAAATCC
AGGGAGGGAGGGCCATCCAGCTAGTTCTAGAACAAAATTCAGGATGTGGC
GTTGCTTCCAAAAGGCAGTACTTGTTCGGTCGCGTAAGCATGAAGATCAA
GCCTCTTCCTGAAAACTCTGCTGGCAACTGCACTGCATTTTACATGACAT
TAAACACCGAGAATGTGAGAAAGGAGATTTGATTAGAGACCCTGCGAAAC
AGAACGGGGGAGCCTCAGAGGGCCACAGAAATATCAATAAAACGCAAAAC
GCCAAAATAAAATAGAGTGAACTTCTGGTTAAACTCCTCTGCACATTACC
ACCATCTCACATTTATCTGGAAACACCCACAGTATCGCCTTCAATGAGGA
AGAAGGGCCACTTAAGTTTTTGCAAAACACTGGGAGGGGCCCTCTTCCCC
ACGAAACTAACTCAGGGCGGGACTAACAAGGATAGGGGACATCCCCAGAG
CGGGATATCAAAAGGGGGCGCAAACAAAAATACATGCTCCGTCAGCTCAG
TCTTAACGCTTCTCTCCAAGCATCTCGACACATGAGTCTCACCCTACCTC
TATTCTCATAA
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