EY711087

Overview
NameEY711087
Unique NameEY711087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.462e-26
Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAK 692
            G+ D     RT++QM++TM+R+ ED     +T+P +     SG    RTPW I + EN+ K+R D+PG+S+ DVKV VE  MLVIK E  +  +         ++  W  N Y SY TR++LPDNV  +KI AE+K+GVL+I+IPK     K
Sbjct:   91 GVLDPMSPMRTMRQMIDTMDRLFEDT----MTFPGRNRA--SGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDG-------RDKHSWGRN-YSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKK 228          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.455e-25
Identity = 66/153 (43.14%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWP-SQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAK 692
            G+ D     RT++QM++TM+R+ ED      T P S + R  SG    R PW I+E E++ K+R D+PG+S+ DVK+ VE+++LVIK E  Q+ E + D         W      SY TR+ LPDN E +KI AE+K+GVL+ITIPK     K
Sbjct:   84 GLLDPLSPMRTMRQMLDTMDRMFED------TMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGE--QKKEDSDD--------SWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERK 220          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.188e-25
Identity = 65/152 (42.76%), Postives = 95/152 (62.50%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAK 692
            G+ D     RT++QMM+TM+R+ ED     +T+P  + R   G    R PW I++ EN+ K+R D+PG+S+ +VKV VE+ +LVIK E  ++ E+  D S       W  N Y SY TR++LPDNV+ +K+ AE+K+GVL I+IPK     K
Sbjct:   99 GLLDPMSPMRTMRQMMDTMDRLFEDT----MTFPGSRNR---GTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEH-KKEESGKDDS-------WGRN-YSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKK 234          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.219e-24
Identity = 62/152 (40.79%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAK 692
            GI D +   R+++Q+++TM+R+ ED     +T+P +      G    R PW I++ E++ ++R D+PG+++ DVKV VE+ MLVIK       E   D S       W S  Y SY TR+ LPDN E +K+ AE+K+GVLYITIPK     K
Sbjct:   38 GILDPWSPMRSMRQILDTMDRVFEDT----MTFPGRN----IGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-------WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERK 174          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24
Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPK 674
            G+ D +   R+++QM++TM+RI ED     +T P +      G    R PW I++ E++ ++R D+PG+S+ DVKV VE+ +LVIK++  + N              W    Y  Y TR+ LPDN E EK+ AE+KDGVLYITIPK
Sbjct:   91 GLLDPWSPMRSMRQMLDTMDRIFED----AITIPGRN----IGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDC---------WSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPK 219          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAE-KAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAK 692
            G+ D     RT++QM++TM+R+ +D     V +P++  R  +   R R PW I E E + K+R D+PG+SR +V+V VE+  LVI+ E K +  E   +G        W      SY  R+ALPD  +  ++ AE+K+GVL +++PK  +  K
Sbjct:   89 GLVDPMSPMRTMRQMLDTMDRLFDD----AVGFPTR--RSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGD----GWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERK 231          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.630e-19
Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 3
Query:  237 GIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQER-VRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAK 692
            G+ D     RT++QM++TM+RI +D     + +P+   R + +G    R PW + E + + ++R D+PG+SR +VKV VE+  LVI+ E  +      +GS       W      SY  R+ALPD  +  K+ AE+K+GVL +T+PK     K
Sbjct:   89 GLVDPMSPMRTMRQMLDTMDRIFDD---VALGFPATPRRSLATG--EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGS---GDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERK 233          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17
Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  225 SLCTGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNV-EFEKISAEVKDGVLYITIPKASSTAK 692
            S  + ++D F A R+V Q+M  M+++ME+PF             R   R  R  W +RE E   ++++D+PG+++ DVKV VE++ L+IK+E  +  E        E+RR         YS+RI L  N+ + + I AE+K+GVL +T+PK     K
Sbjct:   62 SFFSDVFDPFRATRSVGQLMNLMDQLMENPF---------MAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEE------EQRRR--------YSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEK 195          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.764e-15
Identity = 50/146 (34.25%), Postives = 83/146 (56.85%), Query Frame = 3
Query:  240 IWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNV-EFEKISAEVKDGVLYITIPK 674
            ++D F   R+V Q++  M++ ME+P        + +    SG RRG   W I+E ++   +R+D+PG+SR DVK+ +E+  LVI+ E          G   E+  E   +G   +++RI LPD + + ++I AE+K+GVL + IPK
Sbjct:   68 VFDPFSPTRSVSQVLNLMDQFMENPLL-----SATRGMGASGARRG---WDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGE----------GKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195          
BLAST of EY711087 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 38/107 (35.51%), Postives = 67/107 (62.62%), Query Frame = 3
Query:  393 IRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEERREWPSNGYGSYSTRIALPDNVEFEKISAEVKDGVLYITIPKASSTAKSSTLMSI 713
            ++E ++ YK+R +VPG+++ DVK+ V + +L IK +    ++A  +  + EE   W S  YG Y+T ++LPD+ + E I AE+K+GVL + IP+     K+   +S+
Sbjct:  129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD----HKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISV 231          
The following BLAST results are available for this feature:
BLAST of EY711087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
HS21C_SOLLC6.462e-2642.76Small heat shock protein, chloroplastic OS=Solanum... [more]
HS25P_ARATH2.455e-2543.1425.3 kDa heat shock protein, chloroplastic OS=Arab... [more]
HS22C_PETHY4.188e-2542.76Small heat shock protein, chloroplastic OS=Petunia... [more]
HS22C_SOYBN1.219e-2440.79Small heat shock protein, chloroplastic (Fragment)... [more]
HS21C_PEA4.631e-2441.10Small heat shock protein, chloroplastic OS=Pisum s... [more]
HS21C_WHEAT6.920e-2035.95Small heat shock protein, chloroplastic OS=Triticu... [more]
HS26P_ORYSJ2.630e-1935.2926.7 kDa heat shock protein, chloroplastic OS=Oryz... [more]
HS23C_CHERU7.161e-1734.39Small heat shock protein, chloroplastic OS=Chenopo... [more]
HS23M_ARATH1.764e-1534.2523.6 kDa heat shock protein, mitochondrial OS=Arab... [more]
HS26M_ARATH6.702e-1535.5126.5 kDa heat shock protein, mitochondrial OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-F04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711087 ID=EY711087; Name=EY711087; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCGCTGAATCAATCCCAGCCAAAAAAGAGAGCGGCCCCAG
TTTCATCTCCAGGTAACAAAAAATTATACTCTCTTATTACTTCACATTTC
TGAAGCGTAAAACTAATTTAATTCCTGGCTCCAAGGACAAGAAAATTACG
TAATGGATGCAAGACCAACGTGTAGCTTGCAGAAAAACGTGTAATGACCA
ACTTATTAGAAGCTTCTTATGTTTTCTCTGTGTACAGGGATATGGGATAG
TTTTCCTGCTGCGAGGACGGTGCAACAGATGATGGAAACCATGGAAAGAA
TAATGGAGGATCCTTTTGCTTACGGAGTCACTTGGCCTTCACAACAAGAA
AGGGTGAGAAGTGGATACAGACGGGGAAGAACGCCTTGGGCCATCAGGGA
AACGGAAAACGACTACAAGATTAGGTTAGACGTGCCTGGCATGAGCAGGA
ATGATGTTAAGGTACGGGTTGAAGAGAGCATGCTCGTAATCAAGGCAGAA
AAGGCTCAAAGGAACGAAGCAAACACTGATGGAAGTACAGTTGAGGAAAG
AAGAGAGTGGCCAAGCAATGGTTACGGAAGCTACAGCACTAGAATTGCAT
TGCCTGACAACGTAGAGTTTGAGAAGATTTCAGCAGAGGTGAAAGATGGC
GTACTGTATATAACCATTCCAAAGGCCAGCTCCACCGCCAAATCGTCGAC
ATTAATGTCCATAGGACAAGTATTCTGGTAANCCTCAGTTCCACATANGG
ACAAACTAGATCTGCCCAAAGNAANGTGTTGGGAAAAAATAAGTGGCAGT
AGGGTAATTTGATTTCTCATGAATTTCCACAGGAAGGTAGCGATATATGT
TAAGACTGTCCAAACTCGCCAACTTTTGTCTTAGAACTAAATGGCCCATC
CAAAAAAAAAAAAAAAAAAAAA
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