EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RK6_ARATH (50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana GN=RPL6 PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.866e-77 Identity = 142/173 (82.08%), Postives = 159/173 (91.91%), Query Frame = 3 Query: 12 KESRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDS-FLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 KESRIGKQPI VPSNVTI L GQDLKVKGPLGEL+L YPREV++ +E+S FLRV+KTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKL +VGVGYRA ++G+ LVL+LGFSHPV+M IPD +KV VEENTRITVSGYDKS IGQFAA++RKWRPPEPYKGKGVKY DE++RR Sbjct: 42 KESRIGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRR 214
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CYAA5 (50S ribosomal protein L6 OS=Cyanothece sp. (strain ATCC 51142) GN=rplF PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.105e-48 Identity = 93/170 (54.71%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ VTI + GQ + VKGP G L L P EV V++E + V++ ++R A + HGLFRTL NM+ GVS+GFEK+L + GVGYRA +G L L++G+S PV MT+P GI V VE NT++ VSG DK +G AA IR RPPEPYKGKG++Y DE +RR Sbjct: 2 SRIGKKPIPLPNKVTIDIKGQHIAVKGPKGSLELDLPSEVTVNQEGETVEVQRVDDSRTARERHGLFRTLVANMIQGVSQGFEKRLNIQGVGYRAQAQGSKLTLNVGYSKPVEMTMPQGINVAVENNTQVVVSGIDKEIVGNIAAKIRGVRPPEPYKGKGIRYQDEYVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CYAP7 (50S ribosomal protein L6 OS=Cyanothece sp. (strain PCC 7424) GN=rplF PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.180e-47 Identity = 93/170 (54.71%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ VT+ + G + VKGP GEL P V V++++ LRV + ++R A Q HGL RTL NMV GVSKGFEK+L++ GVGYRAA +G L L++G+S PV M +P GI V VE+NT IT++G DK +G AA IR RPPEPYKGKG++Y EV+RR Sbjct: 2 SRIGKRPITIPNKVTVNIDGSHVAVKGPKGELQRTLPTLVIVEQDEGVLRVVRQDDSRTARQRHGLCRTLVSNMVEGVSKGFEKRLEIQGVGYRAAAQGSKLTLNVGYSKPVEMDMPSGIGVAVEKNTEITITGIDKEIVGNVAAKIRAVRPPEPYKGKGIRYKGEVVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_ANASP (50S ribosomal protein L6 OS=Anabaena sp. (strain PCC 7120) GN=rplF PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.541e-47 Identity = 92/170 (54.12%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI VP+ V +T+ G + VKGP GELS P V V +E L+V + ETR + Q+HGL RTL NMV GVS+GF+++L++ GVGYRA ++G+ LVL++G+SH V++ PDGI+ VE NT + VSGYDK +G AA +R RPPEPYKGKG++Y EV+RR Sbjct: 2 SRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPANVSVSQEGETLQVTRRDETRTSRQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLVLNMGYSHQVQIEPPDGIQFVVENNTNVIVSGYDKEIVGNTAAKVRAVRPPEPYKGKGIRYAGEVVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_ANAVT (50S ribosomal protein L6 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplF PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.013e-47 Identity = 92/170 (54.12%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI VP+ V +T+ G + VKGP GELS P V V +E L+V + ETR + Q+HGL RTL NMV GVS+GF+++L++ GVGYRA ++G+ L+L++G+SH V++ PDGI+ VE NT + VSGYDK +G AA IR RPPEPYKGKG++Y EV+RR Sbjct: 2 SRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPVNVSVSQEGETLQVTRRDETRTSRQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLILNMGYSHQVQIEPPDGIQFAVENNTNVIVSGYDKEIVGNTAAKIRAVRPPEPYKGKGIRYAGEVVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_NITWN (50S ribosomal protein L6 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplF PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47 Identity = 92/170 (54.12%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ VPS VT T+ GQ +K+KGP GEL V +V+V ED ++V ET+RA ++G R N+V GV+KGFEKKL+++GVGYRAAL+G+ L L+LG+SH V +P+GI + V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY DE I R Sbjct: 2 SRIGKRPVTVPSGVTATVEGQTVKMKGPKGELRFVVHDDVEVKLEDGAVKVAPRYETKRAQALYGTARAQVANLVAGVTKGFEKKLEIIGVGYRAALQGKSLQLALGYSHDVNYAVPEGITIAVPKPTEITITGNDAQRVGQVAAEIRGYRPPEPYKGKGVKYADETIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_THEEB (50S ribosomal protein L6 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplF PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.988e-47 Identity = 94/178 (52.81%), Postives = 126/178 (70.79%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEEN--------TRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P NVT+TL GQ + VKGP G+LS V+P EV V +E + V++ ++R A + HGL RTL NMV GVS+GF KKL++ GVGYRA L+G+ LVLS+G+SHPV + P+GI + +E+N T + VSG DK +G +A IR RPPEPYKGKG++Y+ E +RR Sbjct: 2 SRIGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVFPPEVNVVQEGEAIVVKRRDDSRPAKERHGLCRTLLANMVEGVSQGFTKKLEIQGVGYRAQLQGKTLVLSMGYSHPVEIVPPEGITLEIEDNQGKKVQQGTIVLVSGIDKELVGNTSARIRAVRPPEPYKGKGIRYMGEFVRR 179
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_ACAM1 (50S ribosomal protein L6 OS=Acaryochloris marina (strain MBIC 11017) GN=rplF PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.988e-47 Identity = 92/170 (54.12%), Postives = 122/170 (71.76%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK PI +P V +T+ GQ + VKGP GELS EV +++ D+ + V + E+R A Q HGL RTL NMV GVSKGFEKKLQ+ GVGYRA ++G+ L+L++G+S+PV + P+G++V VE NT + VSG +K +G AA IR RPPEPYKGKG++Y DE +RR Sbjct: 2 SRIGKVPIPIPDKVNVTIKGQAVTVKGPKGELSREITPEVAIEQADNLVTVTRRNESRIARQRHGLSRTLIANMVEGVSKGFEKKLQIQGVGYRAQVQGRNLILNVGYSNPVTIEPPEGVQVAVESNTNVIVSGINKEVVGNTAARIRAVRPPEPYKGKGIRYADEYVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNJA (50S ribosomal protein L6 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplF PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.225e-46 Identity = 91/170 (53.53%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ V + + GQ + VKGP GELS P + V +E L+V + E+R A Q+HGL RTL NMV GVS+GFE++L++VGVGYRA+ +G L+L++G+SHPV + P GI++ VE N I VSG DK +G AA IR RPPEPYKGKG++YV E +RR Sbjct: 2 SRIGKRPIALPAKVEVQIEGQQISVKGPKGELSRSLPPLIAVHQEAQTLKVSRVNESRPARQLHGLCRTLVANMVDGVSRGFERRLELVGVGYRASTQGNKLILNVGYSHPVEIPFPPGIQIAVEGNNVIVVSGIDKELVGNTAARIRAVRPPEPYKGKGIRYVGEQVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_TRIEI (50S ribosomal protein L6 OS=Trichodesmium erythraeum (strain IMS101) GN=rplF PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.795e-46 Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SRIGK PI +P VTIT+ GQ + VKGPLGELS V P E+ V +++ + V+ ++RRA Q +GL RTL NMV GVSKG+EK+L + GVGYRA ++G+ LVL++G+S PV M P+GI + VE NT + V+G +K +G AA IR RPPE YKGKGV+Y EVI+ Sbjct: 2 SRIGKLPIPIPKKVTITIEGQKVTVKGPLGELSRVLPPEIAVKEQENTIIVKPQEQSRRARQRYGLCRTLVANMVEGVSKGYEKRLVIQGVGYRAQVQGKTLVLNVGYSKPVEMPAPEGINIAVENNTNVIVNGINKELVGNTAAKIRAVRPPEVYKGKGVRYAGEVIK 170 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |