EY711073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14 Identity = 51/185 (27.57%), Postives = 83/185 (44.86%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQ-----WKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPT 660 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ Q W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + T Sbjct: 19 SYDFHGRRMATCSSDQSVKVWDKSDNGEWNCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSNT 191
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_XENTR (Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPN 192
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_PONAB (Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPN 192
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_HUMAN (Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPN 192
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1B_XENLA (Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-B PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSENVNWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPN 192
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1A_XENLA (Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-A PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSENGNWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPN 192
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_DANRE (Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13 Identity = 48/166 (28.92%), Postives = 76/166 (45.78%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQ-----WKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNP 603 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ Q W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP Sbjct: 19 SYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ----------HEISCKLACSCISWNP 172
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_BOVIN (Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V++YE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQ----------HEISCKLSCSCISWNPSSSRAHAPMIAVGSDDSSPN 192
BLAST of EY711073 vs. ExPASy Swiss-Prot
Match: SEH1_MOUSE (Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13 Identity = 51/186 (27.42%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 121 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSFELVAAYSDGHVKVYELLDPLILKNWQLQGGFPNAIDSVTMLRRLMPIGSISWNPQRVKTRDLVLFSGSIQTPTN 663 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L +DG V+VYE D + L W LQ + + ISWNP + ++ GS + N Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQ----------HEVSCKLCCSCISWNPSSSRAHPPMIAVGSDDSSPN 192 The following BLAST results are available for this feature:
BLAST of EY711073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711073 ID=EY711073; Name=EY711073; organism=Citrus sinensis; type=EST; length=926bpback to top |