EY711069

Overview
NameEY711069
Unique NameEY711069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig87 contig Csv1_Contig87:259..1136. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: PSL1_HUMAN (Signal peptide peptidase-like 2B OS=Homo sapiens GN=SPPL2B PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLWT 288
            S++GFGDIL+PGL++A+  R+D     S    YF+   +AYG+GLL+T+VAL LM   GQPALLY+VP TL T  A+   R +L V WT
Sbjct:  415 SLLGFGDILVPGLLVAYCHRFDIQVQSSRV--YFVACTIAYGVGLLVTFVALALMQ-RGQPALLYLVPCTLVTSCAVALWRRELGVFWT 500          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: PSL1_RAT (Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.814e-15
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLWT 288
            S++GFGDIL+PGL++A+  R+D     S    YF+   +AYGLGLL+T+VAL LM  HGQPALLY+VP TL T   +   R ++   WT
Sbjct:  408 SLLGFGDILVPGLLVAYCHRFDIQVQSS--RIYFVACTIAYGLGLLVTFVALVLM-RHGQPALLYLVPCTLLTSCTVALWRREMGAFWT 493          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: PSL1_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLWT 288
            S++GFGDIL+PGL++A+  R+D     S    YF+   +AYG+GLL+T+VAL LM   GQPALLY+VP TL T  ++   R +L + WT
Sbjct:  411 SLLGFGDILVPGLLVAYCHRFDIQVQSS--RVYFVACTIAYGIGLLVTFVALALMQ-MGQPALLYLVPCTLITSFSVALWRKELAMFWT 496          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: PSL1_MOUSE (Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLWT 288
            S++GFGDIL+PGL++A+  R+D     S    YF+   +AYGLGLL+T+VAL LM   GQPALLY+VP TL T   +   R +L   WT
Sbjct:  408 SLLGFGDILVPGLLVAYCHRFDIQVQSS--RIYFVACTIAYGLGLLVTFVALVLMQ-RGQPALLYLVPCTLLTSCTVALWRRELGAFWT 493          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: PSL2_MOUSE (Signal peptide peptidase-like 2A OS=Mus musculus GN=Sppl2a PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 37/88 (42.05%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLW 285
            S++GFGDI++PGL+IA+  R+D     S+   Y++ + +AY +G++IT+V L +M   GQPALLY+VP TL T   +   R +++  W
Sbjct:  410 SVLGFGDIIVPGLLIAYCRRFDVQTGSSI---YYISSTIAYAVGMIITFVVLMVMK-TGQPALLYLVPCTLITVSVVAWSRKEMKKFW 493          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: IMP5_HUMAN (Signal peptide peptidase-like 2C OS=Homo sapiens GN=SPPL2C PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLWT 288
            SI+GFGDI++PG ++A+  R+D       +  YF+   +AY +GLL+T++A+ LM   GQPALLY+V  TL T LA+   R +L + WT
Sbjct:  442 SILGFGDIVVPGFLVAYCCRFD--VQVCSRQIYFVACTVAYAVGLLVTFMAMVLMQ-MGQPALLYLVSSTLLTSLAVAACRQELSLFWT 527          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: IMP5_MOUSE (Signal peptide peptidase-like 2C OS=Mus musculus GN=Sppl2c PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.707e-12
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLWT 288
            SI+GFGDI++PG ++A+  R+D +  +S Q  Y++   +AY +GLL+T+VA+ LM   GQPALLY+V  TL T LA+   R +  + WT
Sbjct:  451 SILGFGDIVVPGFLVAYCHRFD-MQVQSRQV-YYMACTVAYAVGLLVTFVAMILMQ-MGQPALLYLVSSTLLTSLAVATCRQEFTLFWT 536          
BLAST of EY711069 vs. ExPASy Swiss-Prot
Match: PSL2_HUMAN (Signal peptide peptidase-like 2A OS=Homo sapiens GN=SPPL2A PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   22 SIIGFGDILLPGLIIAFSLRYDWLANKSLQAGYFLWAMLAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLRVLW 285
            SI+GFGDI++PGL+IA+  R+D     S    Y++ + +AY +G+++T+V L LM   GQPALLY+VP TL T   +  +R +++  W
Sbjct:  406 SILGFGDIIVPGLLIAYCRRFDVQTGSSYI--YYVSSTVAYAIGMILTFVVLVLMK-KGQPALLYLVPCTLITASVVAWRRKEMKKFW 490          
The following BLAST results are available for this feature:
BLAST of EY711069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSL1_HUMAN9.670e-1651.69Signal peptide peptidase-like 2B OS=Homo sapiens G... [more]
PSL1_RAT2.814e-1550.56Signal peptide peptidase-like 2B OS=Rattus norvegi... [more]
PSL1_CHICK4.799e-1549.44Signal peptide peptidase-like 2B OS=Gallus gallus ... [more]
PSL1_MOUSE8.186e-1550.56Signal peptide peptidase-like 2B OS=Mus musculus G... [more]
PSL2_MOUSE1.001e-1242.05Signal peptide peptidase-like 2A OS=Mus musculus G... [more]
IMP5_HUMAN1.307e-1244.94Signal peptide peptidase-like 2C OS=Homo sapiens G... [more]
IMP5_MOUSE1.707e-1246.07Signal peptide peptidase-like 2C OS=Mus musculus G... [more]
PSL2_HUMAN2.229e-1243.18Signal peptide peptidase-like 2A OS=Homo sapiens G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711069 ID=EY711069; Name=EY711069; organism=Citrus sinensis; type=EST; length=878bp
TTGCTCGACCCACGCGTCCGCAGCATCATCGGTTTTGGTGATATTCTTTT
ACCTGGATTGATTATAGCATTTTCACTCAGGTACGACTGGCTAGCAAATA
AGAGTCTTCAGGCTGGATACTTTTTGTGGGCAATGTTGGCTTATGGATTA
GGTCTTCTCATCACATATGTGGCACTGAACTTGATGGATGGCCACGGCCA
ACCTGCTCTGCTTTATATTGTCCCATTCACGTTAGGGACTTTTCTGGCAT
TGGGGAAGAAGAGAGGCGATCTCAGGGTTCTATGGACAAGAGGAGAACCG
GAAAGGCCCTGCCCCCATGTCCATCTCCAACACAGTCATGAACTAAATGT
AGAAAAATAAGGCTTCTTTTGTTGTAATTATGATGTAGAGTTTGTAGTAT
ATCTCTAATCATTGGAAATCGGTTGAAAAAATAGCCTGTCAAGCTTAGCA
TAACAGTGGAATGTTGTATGAAAGCCCAAGTGATCATCAATTAATCTGGG
GCCTAATTGTAATGTCTTTTGACATAAATAAATTTCCTTTCCCAAAAAAN
NNNNNNNNNNNNANAAAAANANAAAAAAAAANAAANAAAAAAAANNNNAN
NAAANANAAAAAAAANGGGGGCCCATAATAAGAATAAANANAANNAAAAA
GGNNTTNNAAGAGGGGGGCGCCTCCAAAAGGGCACCAAATATCCTGCCCG
GGGGCGAGAAAATCAAACTCTTTATAAGGGAAACCCAATTTTATTCCCGC
GCCCGCCTTTAACACCCCCCCCTGAGAAACCCCTGGGGAAAACCCAATAA
GACCCCTGGGAAGCACCCCCCCTTCCGCGGGGGGGAAAAATGGAAAAGGC
CCCCCCCCTCCCCCTCCCTAAATTTCCA
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