EY711062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_ARATH (Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 1.895e-118 Identity = 158/169 (93.49%), Postives = 164/169 (97.04%), Query Frame = 2 Query: 38 FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRID 544 FLSPHLHFGEVSVRKVFHLVRIKQV+WANEGN+AG+ESVNLFLKSIGLREYSRY+SFNHPYSHERPLLGHLKFF W VDE YFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GT+PD R FDRID Sbjct: 249 FLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRID 417 HSP 2 Score: 70.4774 bits (171), Expect = 1.895e-118 Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 +PQFEGYKFDPNGEYVRRWLPEL+RLPT+WI NA Sbjct: 418 NPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNA 454 HSP 3 Score: 55.4546 bits (132), Expect = 1.895e-118 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 3 Query: 639 HPWKCPKSGLQAAGMELGSHYPFPLKRIGAPKCGVDQTLSKCGHKETPSKPSF*KELRKGLGNSL*FTPNCP--FPRKIKGGET 884 HPW P+S LQAAG+ELGS+YP P+ + K + + LS+ E S+ + +GLG+S P FPR I ET Sbjct: 450 HPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMWQLEAASRAAIENGSEEGLGDSA-EVEEAPIEFPRDITMEET 532
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_SINAL (Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 3.675e-73 Identity = 117/179 (65.36%), Postives = 143/179 (79.89%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDIHSLRVTSLTP 577 LSP+LHFGE+SVR+VF R+KQ+ WA + N G+ES +LFL+ IGLR+YSR + FN P++HE+ LL HL+FF W D FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D +GWQYISG++PDG DR+D +++ P Sbjct: 246 LSPYLHFGEISVRRVFQCARMKQIIWARDKNGEGEESADLFLRGIGLRDYSRIICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDP 424 HSP 2 Score: 33.113 bits (74), Expect = 3.675e-73 Identity = 12/25 (48.00%), Postives = 19/25 (76.00%), Query Frame = 3 Query: 639 HPWKCPKSGLQAAGMELGSHYPFPL 713 HPW P + L+A+G+ELG++Y P+ Sbjct: 446 HPWDAPLTVLKASGVELGTNYAKPI 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY2_ARATH (Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 9.730e-72 Identity = 122/179 (68.16%), Postives = 143/179 (79.89%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDIHSLRVTSLTP 577 LSP+LHFGE+SVR VF R+KQ+ WA + N G+ES +LFL+ IGLREYSRY+ FN P++HE+ LL HL+FF W D FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG+IPDG DR+D +L+ P Sbjct: 247 LSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 425
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_SYNY3 (Deoxyribodipyrimidine photo-lyase OS=Synechocystis sp. (strain PCC 6803) GN=phrA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.394e-30 Identity = 55/171 (32.16%), Postives = 95/171 (55.56%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDIHS 553 LS L FG +S R ++ +W ++ S+ + + + RE+ ++ ++ P + P + F W ++ +F+AW +GRTGYP++DA M +L TGW+H+R R++V+SF +K L L W+WG YF TL D DL ++ GWQ+ + + D + + H+ Sbjct: 257 LSAALKFGVISPRTLWQTTL---EAWEQSRSEEARASIETWQQELAWREFYQHCLYSFPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVASFLIKDLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPLRIFNPHT 424 HSP 2 Score: 41.9726 bits (97), Expect = 1.394e-30 Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLPT 627 +P + KFDP GEY+R WLP+LAR T Sbjct: 421 NPHTQAQKFDPEGEYIRTWLPQLARFDT 448
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_VIBCH (Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae GN=phrA PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.312e-29 Identity = 60/168 (35.71%), Postives = 94/168 (55.95%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LSP+L G +S R+ + R+ S E + E ++L + RE+ +++ P S R + W D F+ W +G+TGYP+VDA MR+L TGW+H+R+R++V+SF K L + WRWG +YF L+D D ++ GWQ+ + T DG+ + RI Sbjct: 239 LSPYLAIGVLSARQC--VARLYHESSMGELS----EGAQVWLSELIWREFYQHLVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRI 400 HSP 2 Score: 41.5874 bits (96), Expect = 3.312e-29 Identity = 15/31 (48.39%), Postives = 24/31 (77.42%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLPTEWI 636 +P +G KFDPNG+++RRW+PEL + + +I Sbjct: 402 NPVSQGEKFDPNGDFIRRWVPELRSVSSAYI 432
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_ECOLI (Deoxyribodipyrimidine photo-lyase OS=Escherichia coli (strain K12) GN=phrB PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.613e-28 Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LS L G +S R+ H + +Q + G AG +++L + RE+ R++ HP RP + W + + +AW++G+TGYP+VDA MR+L +TGW+H+R+R++ +SF VK L + WR G +YF L+D DL ++ GWQ+ + T D + RI Sbjct: 238 LSASLATGGLSPRQCLHRLLAEQPQALDGG--AG----SVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRI 399 HSP 2 Score: 37.3502 bits (85), Expect = 1.613e-28 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLP 624 +P +G KFD GE++R+WLPEL +P Sbjct: 401 NPTTQGEKFDHEGEFIRQWLPELRDVP 427
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_STRGR (Deoxyribodipyrimidine photo-lyase OS=Streptomyces griseus GN=phr PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.735e-28 Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP---YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 LSPHLHFG VS ++ H R K G G+ F++ + R++ + + P +S RP + W D AW+ G TGYPLVDA MR+L GW+H+R R++ +SF K L + WR G ++F D L+D D+ ++ L WQ+++GT D R Sbjct: 234 LSPHLHFGTVSAAELVHRAREK-------GGLGGEA----FVRQLAWRDFHHQVLADRPDASWSDYRP-----RHDRWRSDADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTKTLYVDWREGARHFLDLLVDGDVANNQLNWQWVAGTGTDTR 382 HSP 2 Score: 35.4242 bits (80), Expect = 2.735e-28 Identity = 13/26 (50.00%), Postives = 19/26 (73.08%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARL 621 +P +G +FD G+YVR W+PELA + Sbjct: 388 NPVIQGKRFDARGDYVRGWVPELAEV 413
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_SALTY (Deoxyribodipyrimidine photo-lyase OS=Salmonella typhimurium GN=phrB PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.852e-28 Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LS L G +S R+ H + +Q + G + ++L + RE+ R++ +P +P + K +W + YF+AW++G TGYP+VDA MR+L ATGW+H+R+R++ +SF VK L + WR G +YF L+D DL ++ GWQ+ + T D + RI Sbjct: 239 LSASLATGGLSPRQCLHRLLAEQPQALDGGPGS------VWLNELIWREFYRHLMTWYPALCKHQPFIRWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRI 400 HSP 2 Score: 34.6538 bits (78), Expect = 7.852e-28 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLP 624 +P +G +FD +GE++R+WLP L +P Sbjct: 402 NPTTQGERFDRDGEFIRQWLPALRDIP 428
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_BACPF (Deoxyribodipyrimidine photo-lyase (Fragment) OS=Bacillus pseudofirmus GN=phr PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.513e-27 Identity = 55/167 (32.93%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LSP++ G VS R +++ + +A S FLK + R++ R + F P +R ++ + +W D+ +W++G TG+P+VDAGMR+L GW+H+R+R++ +SF K L + WR G +YF L+D D S+ GWQ+ + D + RI Sbjct: 104 LSPYIKTGAVSSRSIYYHIL---------NAEADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYRELNWSHDQDDLTSWKRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTKDLLIDWRLGERYFERMLIDYDPSSNIGGWQWAASVGTDAVPYFRI 261 HSP 2 Score: 32.7278 bits (73), Expect = 6.513e-27 Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLPTEWI 636 +P + +FD NG Y+R ++PEL +P +I Sbjct: 263 NPVTQSKRFDENGTYIRTYIPELNHVPDHYI 293
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_NEUCR (Deoxyribodipyrimidine photo-lyase OS=Neurospora crassa GN=phr-1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.408e-26 Identity = 51/168 (30.36%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPY-SHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LS H G +S R R + + G G+E + ++ + R++ +++ + PY +P W + +F AW QGRTG+P++DA MR++ +TG++H+R+R++V+SF K L + WR G +YF + L+D D S+ GW + + D + + R+ Sbjct: 394 LSVHFASGTLSARTAIRTARDRNNTKKLNG---GNEGIQRWISEVAWRDFYKHVLVHWPYVCMNKPFKPTYSNIEWSYNVDHFHAWTQGRTGFPIIDAAMRQVLSTGYMHNRLRMIVASFLAKDLLVDWRMGERYFMEHLIDGDFASNNGGWGFAASVGVDPQPYFRV 558 HSP 2 Score: 36.965 bits (84), Expect = 2.408e-26 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLP 624 +P + KFDP+G+Y+R+W+ EL LP Sbjct: 560 NPLLQSEKFDPDGDYIRKWVEELRDLP 586 The following BLAST results are available for this feature:
BLAST of EY711062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711062 ID=EY711062; Name=EY711062; organism=Citrus sinensis; type=EST; length=891bpback to top |