EY711061

Overview
NameEY711061
Unique NameEY711061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711061 vs. ExPASy Swiss-Prot
Match: FMDA_METME (Formamidase OS=Methylophilus methylotrophus GN=fmdA PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.094e-51
Identity = 96/179 (53.63%), Postives = 125/179 (69.83%), Query Frame = 3
Query:  213 VVPIDLKKKPNEQKLTLHNRWHPEIPPVAEVKVGELFRVEMVDWTGGAIKDNDSAIDVKTLDLSTVHYLSGPIKVVDEQGIPAKPGDLLAVEICNLGPLPGDEWGYTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHITGVRFPGLTHPGIIGTAPSMELLKIWDERERELEET 749
            +V +DL KKP EQ   +HNRWHP++P +A VK G+ FRVE +DWTGG I +NDSA DV+ +DL+ VHYLSGPI V       A+PGDL+ V+I ++G     +WG+   F +ENGGGFLTDHFP A+K IW F G+Y  S H+  VR+ G+ HPG+IG  PS ELL  W++RE +L  T
Sbjct:    4 IVKLDLDKKPWEQDGQIHNRWHPDLPMIAMVKPGDEFRVECMDWTGGQIGNNDSANDVRDVDLTQVHYLSGPIGVEG-----AEPGDLMVVDILDVGTFDDSQWGFNGLFAKENGGGFLTDHFPEASKTIWDFHGVYTTSRHVPKVRYAGIMHPGLIGCLPSKELLDTWNKREGDLIAT 177          
BLAST of EY711061 vs. ExPASy Swiss-Prot
Match: FMDA_SCHPO (Putative formamidase C869.04 OS=Schizosaccharomyces pombe GN=SPAC869.04 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.518e-50
Identity = 95/179 (53.07%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  204 PTVVVPIDLKKKPNEQKLTLHNRWHPEIPPVAEVKVGELFRVEMVDWTGGAIKDNDSAIDVKTLDLSTVHYLSGPIKVVDEQGIPAKPGDLLAVEICNLGPLPGDEWGYTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHITGVRFPGLTHPGIIGTAPSMELLKIWDEREREL 740
            P  +V +DL K   EQ   LHNRWHP+IP    +  GE  ++E +DWTGG IK++DSA D+K +DL+ +HYLSGP ++       A+PGD+L VEI ++ PL    WGY+  F +ENGGGFL +H+P A KA++ FEGI+  S HI GVRFPGL HPGIIGTAPS E+L  W+ RE  L
Sbjct:    3 PRTIVKVDLNKPAWEQP-NLHNRWHPDIPFAESIDEGETVKIECLDWTGGQIKNDDSAEDIKNVDLTRIHYLSGPFEIKG-----AEPGDVLVVEIQDVQPLENQPWGYSGIFAKENGGGFLDEHYPKAAKAVFDFEGIFCSSRHIPGVRFPGLIHPGIIGTAPSKEILAEWNRREGAL 175          
BLAST of EY711061 vs. ExPASy Swiss-Prot
Match: AMDA_MYCSM (Acetamidase OS=Mycobacterium smegmatis GN=amdA PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 97/189 (51.32%), Postives = 123/189 (65.08%), Query Frame = 3
Query:  204 PTVVVPIDLKKKPNEQKLTLHNRWHPEIPPVAEVKVGELFRVEMVDWTGGAIKDNDSAIDVKTLDLSTVHYLSGPIKVVDEQGIPAKPGDLLAVEICNLGPLP-------GDEWGYTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHITGVRFPGLTHPGIIGTAPSMELLKIWDERERELEET 749
            P VV  +D  K   +Q +  HNRWHP+IP  A VK G  FR+E  +WT G I +NDSA DV+ +DL+  H LSGPIKV       A+PGDLL V+I ++GP+P       G+ WGY+  F + NGGGFLTD++P A KAIW F G    S H+ GVR+ G+THPG+ GTAPS +LL  W+ERER L  T
Sbjct:    2 PEVVFSVDHSKSMRDQAVPGHNRWHPDIPAAATVKPGSEFRIECKEWTDGQIGNNDSANDVRDVDLAPCHMLSGPIKVEG-----AEPGDLLIVDILDIGPVPQTNGPNCGEGWGYSGIFAKVNGGGFLTDYYPDAYKAIWDFHGQQCTSRHVPGVRYTGITHPGLFGTAPSPDLLAKWNERERALIAT 185          
The following BLAST results are available for this feature:
BLAST of EY711061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FMDA_METME1.094e-5153.63Formamidase OS=Methylophilus methylotrophus GN=fmd... [more]
FMDA_SCHPO3.518e-5053.07Putative formamidase C869.04 OS=Schizosaccharomyce... [more]
AMDA_MYCSM2.521e-4851.32Acetamidase OS=Mycobacterium smegmatis GN=amdA PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711061 ID=EY711061; Name=EY711061; organism=Citrus sinensis; type=EST; length=880bp
CACGCGTCCGCCTGAGCAGATTCCCTGGAAAAATTTGTCCCCCAATTTGT
CAGTCAGCTCTCAGCTAGCAAGTATCCCATCCGGACGTGTCGACTTCTTT
TTCTACAACAAACCGAAATTTGATTAATCTAATAAATCATAAAAAATATA
AGAATCTTGAAACTCTCTGAATCTTCACAGATTCATCCATGGCTCCAACA
ACCCCAACGGTGGTAGTGCCAATAGACTTGAAGAAGAAACCAAATGAGCA
AAAGCTAACCCTTCACAACAGATGGCACCCGGAGATACCTCCGGTGGCAG
AAGTTAAAGTTGGCGAGCTTTTCAGAGTAGAGATGGTAGATTGGACGGGG
GGTGCGATAAAAGATAATGATTCTGCAATTGATGTGAAAACCTTAGACCT
CTCCACTGTGCATTATCTCAGCGGACCGATCAAAGTTGTGGATGAACAAG
GAATTCCAGCGAAGCCAGGTGATCTTCTTGCAGTTGAAATATGCAACTTG
GGTCCTCTGCCTGGAGATGAATGGGGTTATACAGCAACATTTGATAGAGA
AAATGGAGGTGGTTTTTTGACTGATCATTTCCCTTGTGCAACCAAAGCTA
TTTGGTACTTTGAAGGAATTTATGCCTACTCTCCTCACATAACGGGGGTA
CGATTTCCAGGTTTAACTCACCCTGGCATAATTGGAACTGCGCCATCAAT
GGAACTCCTGAAGATATGGGATGAAAGGGAAAGAGAACTTGAAGAAACTG
GTCTTAATCCCTCAAATTATGTGAGGTCTTGCATACGCGACCATTGGCAA
ACTTACATTGACCGAGGGCTGCTTGCTTGGACAAATCCAGAAGGACTCCT
GAATGGNAAAAATGCTATGGAGCTGCGAGG
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