EY711057

Overview
NameEY711057
Unique NameEY711057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711057 vs. ExPASy Swiss-Prot
Match: YVRB_BACSU (Uncharacterized ABC transporter permease protein yvrB OS=Bacillus subtilis GN=yvrB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 3 
Query:  228 ISCVVSLGFGSARVPVDVVWRILLHKAFGMGEVDWSAGQEHIVWLIRVPRMXXXXXXXXXXXXXXXXXXXXTRNPLADPHLLGVTSGATLGAVIVV---LHVGEVIGLLTLPIAAFIGALLSMIVVL 599
            +S ++ +  GS  +P+  V+R+  H+ FG           +I+  IR+PR+                     +NPLADP+ LGV+SGA++GAV+ +   LH+  VIG  TLP+ +   AL +M  VL
Sbjct:   27 VSIILGISCGSLHIPIPAVFRVFWHQGFGGSIGSDDPMYTNIMMNIRLPRVVLAALVGAALSIAGAAFQGLLKNPLADPYTLGVSSGASVGAVVTLFLGLHL-PVIGGFTLPVLSVAAALATMAAVL 152
The following BLAST results are available for this feature:
BLAST of EY711057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YVRB_BACSU4.567e-1133.07Uncharacterized ABC transporter permease protein y... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711057 ID=EY711057; Name=EY711057; organism=Citrus sinensis; type=EST; length=929bp
TACAGCGAAATCACCGCCGATCAAAAAGAGCAGTTCCTCCTGAACAACCC
GGCGCTGCAATCGGTGGACGCGATCAAGAACCAGCGTTTTATCGTGATCC
CCTACGTGCAAGCCACGCCGGGCATCGACAACGTGCTGGCGGTTGAAACC
CTGGCCAAGGGGTTCCACGGCGAATGATTACCCGTCGCTACGCCCTGCTG
CTGAGTGCCCTTGGCGCGTTGTTGCTGATCTCATGCGTGGTCTCGCTGGG
GTTCGGCTCGGCGCGGGTGCCGGTGGACGTGGTGTGGCGGATCTTGCTGC
ATAAAGCCTTCGGCATGGGCGAGGTGGACTGGAGCGCCGGGCAGGAACAT
ATCGTGTGGCTGATCCGCGTACCGCGCATGTTGCTCGGTGCCCTGGTGGG
CGCCGGGCTGGCGTTGATTGGTGCGGTGTTGCAGGCGGTGACGCGCAACC
CGCTGGCGGATCCGCACCTGCTGGGCGTGACCTCCGGCGCCACCCTCGGC
GCGGTGATCGTGGTGTTGCATGTGGGTGAAGTGATCGGCCTGCTGACCCT
GCCCATCGCGGCGTTCATCGGTGCGTTGCTGAGCATGATCGTGGTGCTGG
CGGTGGCCAGTCGCAACGGTCGGCTGGAGAGTGACCGCCTGCTGNTGTGN
CGGGTGGGCGTGTCNTTCGTGATGATGGGCGTGGGCAATTTNNGCTGTGT
CATGGGCGAACATCGCGNCGGCNNTCGCGTGATGTTCTGGAATGCTCGGC
GGCTCGGGTTGGCGCGTTGGAAACTGCTGACAATCCCCTTCCNNCACGTG
TGCTGGGGCTGNTGTTGCTGTTTGGGAATGCACCCCCCGTGACCGCGCTG
ATGGCCGGCGAACCGACCGCCGTGGACCTGGGCCTGAACCCCCCAATGTC
GGCTCAAGGGGTTTTGATCGCTCCCTGAT
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