EY711027

Overview
NameEY711027
Unique NameEY711027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711027_ssr58 microsatellite EY711027_ssr58:58..71. BLAST: Citrus ESTs to Prunus persica proteins V1
EY711027_ssr711 microsatellite EY711027_ssr711:711..722. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 5.334e-54
Identity = 114/190 (60.00%), Postives = 137/190 (72.11%), Query Frame = 2
Query:  146 TEPW-LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIA-ISEGTKYDRNK 697
            TEPW + ENG+  + +K    E+R GRTAHNMSSSSLRKKSDL ++ K+ +  L+  L+N+QEVILGTKL++LFPAIP AII    G ++PW+F LSLLGLTPLAERVSFLTEQ+AFYTGPT+GGLLNATCGNATELIIAI AL   K+ VVKY                  FCGGIA I    ++DR +
Sbjct:    6 TEPWSVAENGNPSITAKGSSRELRLGRTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDRKQ 195          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.241e-52
Identity = 113/190 (59.47%), Postives = 133/190 (70.00%), Query Frame = 2
Query:  149 EPW--LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIA-ISEGTKYDRNK 697
            EPW  + ENG+  V +K    E+RHGRTAHNMSSSSLRKKSDL LV K+    L+  L+N+QEVILGTKL++LF AIPLAI+   + +  P +F LSL+GLTPLAERVSFLTEQ+AFYTGPTVGGLLNATCGNATELIIAI AL   K+ VVKY                  F GGIA I    ++DR +
Sbjct:    6 EPWAAIAENGNANVTAKGSSRELRHGRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQ 195          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.236e-51
Identity = 117/208 (56.25%), Postives = 134/208 (64.42%), Query Frame = 2
Query:  203 HGR--TAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIA-ISEGTKYDRNK----PMSLXAAAACIAGHMLHCYSIRCGLSDILAXDPSLS 805
            HGR  TAHNMSSSSLRKKSD  LV K+    LR  LAN+QEV L TKL+VLFPA+PLAI  QCF F + WVFALSLLGL PLAERVSFLTEQIA YTGPTVGGLLNATCGNATELIIA+FAL + KI+VVK                   FCGG+  +     YDRN+       L  A  C +  +L  Y++  G   + A   + S
Sbjct:   19 HGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAAS 226          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.043e-41
Identity = 94/173 (54.34%), Postives = 121/173 (69.94%), Query Frame = 2
Query:  158 LMENG---SVKVLSKEIRHGRTAHNMSSSSL-RKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIA 664
            L+ENG   S K  ++  R  R    +S+SSL RK+SDL L+S++R+  +RR L N+QEV+LGTKL +LFPA+PLA++   +     WVFALSLLGLTPLAER+SFLTEQIAF+TGPTVGGL+NATCGNATE+IIAI A+ +RK+ +VK                   F GGI+
Sbjct:   14 LLENGGGGSDKPTAETSR--RVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGIS 184          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.711e-39
Identity = 97/203 (47.78%), Postives = 121/203 (59.61%), Query Frame = 2
Query:  209 RTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIAISEG-----TKYDRNKPMSLXAAAACIAGHMLHCYSIRCGLSDILAXDPSL 802
            RTAHN+SSSSLRK SD +L+ K+    LR  LAN+ +V+L T+L +LFPA+ LAI      F + WVF LSL+GL PLAER+SFLTEQIAFYTGPTVGGLLNAT GN TE+IIA+ AL E KI+VVK                   F  GIA         TK        L  A  C +  ++  Y++  G   I++ D +L
Sbjct:   31 RTAHNLSSSSLRKSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAAL 233          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 2
Query:  284 PCLRRCL----ANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKY 592
            P LRR L    A +QEV+LGTKL  LF A+PLA+  +       WVFA SL+GL PLAERVSFL+E IA   GPT GG++NATCGN  ELIIA+FAL++ K++++K+
Sbjct:   59 PLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKW 165          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.156e-22
Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  302 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIAISE 673
            L + + VIL  KL++L P  PLAI+       + W+F LSL+G+TPLAER+ + TEQ+A YTG TVGGLLNAT GN TELII+IFAL    I VV+                   FCGG+  S+
Sbjct:   65 LQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQ 188          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22
Identity = 59/120 (49.17%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  302 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGI 661
            L +I+ VI   KL++L P  PLAI+      ++ WVF L+L+G+TPLAER+ + TEQ+A YTGPTVGGLLNAT GN TELII+IFAL    I VV+                   FCGG+
Sbjct:   65 LNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGL 184          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.046e-21
Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  293 RRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFA-EPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGI 661
            RR L +++ VIL  K++VL P  PLA++        + WVF  SL+G+TPLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL    I VV+                   F GG+
Sbjct:   58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGL 181          
BLAST of EY711027 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.582e-20
Identity = 63/148 (42.57%), Postives = 79/148 (53.38%), Query Frame = 2
Query:  302 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIAISEGTKYDRNKPMSLXAAAACIAGHML 745
            L +I+ VI  +KL++L P  P +II          VF  S+LG+TPLAER+ + TEQ+A YTGPTVGGLLNAT GNATE+IIAI+AL    I VV+                   F GGI         RNK      A A +   +L
Sbjct:   41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIV-------HRNKDQVFSKATAVVNSGLL 181          
The following BLAST results are available for this feature:
BLAST of EY711027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CAX1_ARATH5.334e-5460.00Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX3_ARATH2.241e-5259.47Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1A_ORYSJ3.236e-5156.25Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH1.043e-4154.34Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ3.711e-3947.78Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ4.256e-2757.01Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX5_ARATH3.156e-2247.58Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX2_ARATH5.384e-2249.17Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]
CAX2_ORYSJ2.046e-2145.16Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]
CAX3_ORYSJ6.582e-2042.57Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711027 ID=EY711027; Name=EY711027; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGCCCACGCGTCCGAACTTTTCTCTCTCAATCAATCTTTAA
TCAAAAAATATATATATATATTTTTTATTATTAATTGTTTCTATCCTTCG
TGTTTTTTTTTTTCTTTCAATTGCATTTGTGAAAAAATGGCTTCGACTGA
ACCATGGCTGATGGAGAATGGCAGCGTGAAGGTTTTGAGCAAGGAGATCA
GACATGGAAGAACTGCACACAACATGTCATCCTCCTCATTGAGGAAAAAA
TCCGATCTTACCCTTGTCTCGAAAATTCGATTCCCTTGTCTTAGACGGTG
TCTGGCTAATATCCAGGAGGTCATTTTGGGGACTAAACTTTCAGTTCTCT
TTCCCGCCATTCCTTTAGCCATAATCGGCCAGTGTTTTGGATTTGCAGAA
CCATGGGTATTCGCTCTGAGCTTACTAGGACTGACTCCTCTGGCTGAACG
TGTCAGCTTCTTGACAGAGCAAATTGCTTTCTACACTGGCCCAACAGTGG
GGGGATTATTGAACGCGACATGCGGCAATGCCACGGAGCTCATCATAGCA
ATTTTTGCCCTATACGAACGTAAAATTGACGTGGTCAAATATTCTCTTTT
GGGTTCCATTCTCTCAAACCTTCTTCTGGTTCTTGGCACTTCGCTCTTCT
GTGGAGGNATTGCAATCTCAGAAGGAACAAAATACGATAGAAACAAGCCG
ATGTCACTCNCTGCTGCTGCTGCNTGCATTGCTGGCCACATGTTACATTG
CTATTCAATACGCTGCGGCCTCTCTGATATACTGGCANGCGACCCTTCGC
TATCAGAGCCACAGCATTGAATGCTGATGNTACNTCCCCTATTCCCCTTC
AATGGGAACCCCGGGAATTTTTGAAACTCAGAGGATC
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